RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 P2RX2Q9UBL9 471 aa12.12□□□□□ -0.47
PRAME-213ENST00000492657 A4GNTQ9UNA3 340 aa12.12□□□□□ -0.47
PRAME-213ENST00000492657 H3BN98 237 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 PDE9AO76083 593 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 DRD2P14416 443 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TNNI3P19429 210 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TFF2Q03403 129 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TARDBPQ13148 414 aaKnown RBP eCLIP12.11□□□□□ -0.47
PRAME-213ENST00000492657 IRF3Q14653 427 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 FAM209AQ5JX71 171 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 PGBD2Q6P3X8 592 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 PODNL1Q6PEZ8 512 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 SHISA5Q8N114 240 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 FAIM2Q9BWQ8 316 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 C6orf106Q9H6K1 298 aaPredicted RBP12.11□□□□□ -0.47
PRAME-213ENST00000492657 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 DSPPQ9NZW4 1301 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TLR4O00206 839 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 ZW10O43264 779 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TEAD1P28347 426 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 HYAL1Q12794 435 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 LTB4RQ15722 352 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TMEM35AQ53FP2 167 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 OR6T1Q8NGN1 323 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 DOK4Q8TEW6 326 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 OR1E3Q8WZA6 343 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 FCGR1BQ92637 280 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 KAT2AQ92830 837 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 TSACCQ96A04 125 aaPredicted RBP12.11□□□□□ -0.47
PRAME-213ENST00000492657 GPA33Q99795 319 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 BEX2Q9BXY8 128 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 MMP27Q9H306 513 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 DZANK1Q9NVP4 752 aa12.11□□□□□ -0.47
PRAME-213ENST00000492657 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CACNB4O00305 520 aaPredicted RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 BTN3A3O00478 584 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 FRS3O43559 492 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 DNAJB6O75190 326 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 UPK1BO75841 260 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CCNKO75909 580 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 OSMP13725 252 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 NTSP30990 170 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 IL17RCQ8NAC3 791 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 POLR2J3Q9H1A7 115 aaKnown RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 TICRRQ7Z2Z1 1910 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 METTL15A6NJ78 407 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CYP7B1O75881 506 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 KLF8O95600 359 aaPredicted RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 ADAP00813 363 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 EGFP01133 1207 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 ASGR2P07307 311 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CKMT1AP12532 417 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 NTSR1P30989 418 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 BUD31P41223 144 aaPredicted RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 TUBA1BP68363 451 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 BTN3A2P78410 334 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 MLC1Q15049 377 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 MED22Q15528 200 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 NXNL2Q5VZ03 156 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 ENPP7Q6UWV6 458 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TUBA1AQ71U36 451 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 OR2L5Q8NG80 312 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 OR9A2Q8NGT5 310 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 LCN9Q8WX39 176 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 ELSPBP1Q96BH3 223 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 FUZQ9BT04 418 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CLN6Q9NWW5 311 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CLEC2DQ9UHP7 191 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CES1P1Q9UKY3 287 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 PRSS38A1L453 326 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 ARRDC5A6NEK1 342 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 AGAP5A6NIR3 686 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 FAAHO00519 579 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 MC3RP41968 323 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CASP3P42574 277 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 RGS6P49758 472 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 XKP51811 444 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 SNAP47Q5SQN1 464 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 CCBE1Q6UXH8 406 aaPredicted RBP12.1□□□□□ -0.47
PRAME-213ENST00000492657 ZER1Q7Z7L7 766 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 AMER2Q8N7J2 671 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TCEANCQ8N8B7 351 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 SIMC1Q8NDZ2 872 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TTLQ8NG68 377 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 Q96MT0 163 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 TTYH2Q9BSA4 534 aa12.1□□□□□ -0.47
PRAME-213ENST00000492657 MAN2C1Q9NTJ4 1040 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms