RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 TESCQ96BS2 214 aa18.09■□□□□ 0.49
SEC22A-208ENST00000487572 NXF5Q9H1B4 397 aaKnown RBP18.09■□□□□ 0.49
SEC22A-208ENST00000487572 CLMPQ9H6B4 373 aa18.09■□□□□ 0.49
SEC22A-208ENST00000487572 CCDC134Q9H6E4 229 aa18.09■□□□□ 0.49
SEC22A-208ENST00000487572 FOLH1BQ9HBA9 442 aa18.09■□□□□ 0.49
SEC22A-208ENST00000487572 TAS2R9Q9NYW1 312 aa18.09■□□□□ 0.49
SEC22A-208ENST00000487572 SNX8Q9Y5X2 465 aa18.09■□□□□ 0.49
SEC22A-208ENST00000487572 SUV39H1O43463 412 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 SLC25A12O75746 678 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 TROVE2P10155 538 aaKnown RBP eCLIP18.08■□□□□ 0.48
SEC22A-208ENST00000487572 IL12AP29459 219 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 PRKAG1P54619 331 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 SRSF11Q05519 484 aaKnown RBP18.08■□□□□ 0.48
SEC22A-208ENST00000487572 OPN5Q6U736 354 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 PRR22Q8IZ63 422 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 CLECL1Q8IZS7 167 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 MIER2Q8N344 545 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 TP53INP1Q96A56 240 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 TMEM125Q96AQ2 219 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 RILPQ96NA2 401 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 EQTNQ9NQ60 294 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 MAP10Q9P2G4 905 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 PCDHGA10Q9Y5H3 936 aa18.08■□□□□ 0.48
SEC22A-208ENST00000487572 SLC28A2O43868 658 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 ERN1O75460 977 aaKnown RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 SLC22A3O75751 556 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 S100A3P33764 101 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 DGKQP52824 942 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 GYS2P54840 703 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 MLLT10P55197 1068 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 WNT3P56703 355 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 NRG3P56975 720 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 CORO7P57737 925 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 STX1BP61266 288 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 MLC1Q15049 377 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 MAPKAPK3Q16644 382 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 DPY19L1Q2PZI1 675 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 SPDYE7PQ495Y7 208 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 PRR30Q53SZ7 412 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 MDGA2Q7Z553 956 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 WDR53Q7Z5U6 358 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 ANKRD46Q86W74 232 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 ZNF227Q86WZ6 799 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 GPALPP1Q8IXQ4 340 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 SLC15A4Q8N697 577 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 OR8J2Q8NGG1 315 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 OR5M3Q8NGP4 307 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 LCORQ96JN0 433 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 SIKE1Q9BRV8 207 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 EPN3Q9H201 632 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 TRIM45Q9H8W5 580 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 C3orf14Q9HBI5 128 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 SDR39U1Q9NRG7 319 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 SIRT3Q9NTG7 399 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-208ENST00000487572 KALRNO60229 2985 aa18.07■□□□□ 0.48
SEC22A-208ENST00000487572 BSNQ9UPA5 3926 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 CDK2AP1O14519 115 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 EMC8O43402 210 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 SP1P08047 785 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 SOAT1P35610 550 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 PPICP45877 212 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 DCAF7P61962 342 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 PHC1P78364 1004 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 ANXA8L1Q5VT79 327 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 SLC25A25Q6KCM7 469 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 PAOXQ6QHF9 649 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 LYPD8Q6UX82 237 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 CISD2Q8N5K1 135 aaKnown RBP18.06■□□□□ 0.48
SEC22A-208ENST00000487572 FAM13CQ8NE31 585 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 C17orf47Q8NEP4 570 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 NUP43Q8NFH3 380 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 OR4A15Q8NGL6 344 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 OR9I1Q8NGQ6 314 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 SPACA9Q96E40 222 aaPredicted RBP18.06■□□□□ 0.48
SEC22A-208ENST00000487572 VSTM2LQ96N03 204 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 TMEM120AQ9BXJ8 343 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 CXorf36Q9H7Y0 433 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 TIMMDC1Q9NPL8 285 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 ZIM2Q9NZV7 527 aa18.06■□□□□ 0.48
SEC22A-208ENST00000487572 GPR55Q9Y2T6 319 aaPredicted RBP18.06■□□□□ 0.48
SEC22A-208ENST00000487572 FRG2CA6NGY1 282 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 RNASET2O00584 256 aaKnown RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 PSMG1O95456 288 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 CPSF4O95639 269 aaKnown RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 FBXO45P0C2W1 286 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 NCF2P19878 526 aaPredicted RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 DRD5P21918 477 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 HBA1P69905 142 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 PLCXD2Q0VAA5 305 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 CGB2Q6NT52 195 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 NPSR1Q6W5P4 371 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 RTL4Q6ZR62 310 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 GALNTL5Q7Z4T8 443 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 SLC44A2Q8IWA5 706 aaPredicted RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 TMEM178AQ8NBL3 297 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 GLB1L3Q8NCI6 653 aaPredicted RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 VPS37AQ8NEZ2 397 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 FBXO30Q8TB52 745 aa18.05■□□□□ 0.48
SEC22A-208ENST00000487572 FAM120BQ96EK7 910 aaKnown RBP18.05■□□□□ 0.48
SEC22A-208ENST00000487572 SCMH1Q96GD3 660 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms