RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MED27Q6P2C8 311 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 CYP20A1Q6UW02 462 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 RAD9BQ6WBX8 426 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 PLCZ1Q86YW0 608 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 WFDC8Q8IUA0 241 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 UBQLNLQ8IYU4 475 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 ZCCHC7Q8N3Z6 543 aaKnown RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 RNF10Q8N5U6 811 aaKnown RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 OR7G1Q8NGA0 311 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 DOK4Q8TEW6 326 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 ZNF473Q8WTR7 871 aaKnown RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 GFM2Q969S9 779 aaKnown RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 ADIPOR1Q96A54 375 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 RGMAQ96B86 450 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 TMCO6Q96DC7 493 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 WDR34Q96EX3 536 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 CERS2Q96G23 380 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 NAT9Q9BTE0 207 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 TRIM5Q9C035 493 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 OR10A4Q9H209 315 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 ESRP2Q9H6T0 727 aaKnown RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 RNF122Q9H9V4 155 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 GALNT9Q9HCQ5 603 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 NGBQ9NPG2 151 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 FAIMQ9NVQ4 179 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 ZNF490Q9ULM2 529 aaPredicted RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 EMC9Q9Y3B6 208 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 MRPS18CQ9Y3D5 142 aaKnown RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 RNF115Q9Y4L5 304 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 MAGED1Q9Y5V3 778 aaPredicted RBP6.9□□□□□ -1.3
PDPN-205ENST00000487038 SNX8Q9Y5X2 465 aa6.9□□□□□ -1.3
PDPN-205ENST00000487038 EFCAB8A8MWE9 144 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 SAP18O00422 153 aaKnown RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 ACOX3O15254 700 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 CLOCKO15516 846 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 SH3BGRLO75368 114 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 STK16O75716 305 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 PLGP00747 810 aaPredicted RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 PLAUP00749 431 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 TGFB1P01137 390 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 CGAP01215 116 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 S100BP04271 92 aaPredicted RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 PGRP06401 933 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 THBDP07204 575 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 GPX3P22352 226 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 GABRB3P28472 473 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 NUDT6P53370 316 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 HNRNPH2P55795 449 aaKnown RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 DSCR9P59020 149 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 RPS3AP61247 264 aaKnown RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 VLDLRP98155 873 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 CHIT1Q13231 466 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 TGFBIQ15582 683 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 TSNQ15631 228 aaKnown RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 TBCCQ15814 346 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 TMEM249Q2WGJ8 235 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 C18orf63Q68DL7 685 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 CLEC2AQ6UVW9 174 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 DNM1P46Q6ZS02 220 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 BEND4Q6ZU67 534 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 FAM214BQ7L5A3 538 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 LRRC70Q7Z2Q7 622 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 UBE3DQ7Z6J8 389 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 STK32CQ86UX6 486 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 ZNF610Q8N9Z0 462 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 OR6K3Q8NGY3 331 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 SMAP2Q8WU79 429 aaPredicted RBP6.89□□□□□ -1.31
PDPN-205ENST00000487038 HGDQ93099 445 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 OMA1Q96E52 524 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 SIGLEC10Q96LC7 697 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 TNFRSF13CQ96RJ3 184 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 TMEM79Q9BSE2 394 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 PINK1Q9BXM7 581 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 CXorf21Q9HAI6 301 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 HEY2Q9UBP5 337 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 IKZF3Q9UKT9 509 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 LIPT1Q9Y234 373 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 ZNF175Q9Y473 711 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 NOTCH1P46531 2555 aa6.89□□□□□ -1.31
PDPN-205ENST00000487038 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 C2orf72A6NCS6 295 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 SEC14L5O43304 696 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 SSX4O60224 188 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 CCNT2O60583 730 aaKnown RBP6.88□□□□□ -1.31
PDPN-205ENST00000487038 TNFRSF21O75509 655 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 PRKRAO75569 313 aaKnown RBP6.88□□□□□ -1.31
PDPN-205ENST00000487038 IGHV4-39P01824 125 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 CD3EP07766 207 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 SOD3P08294 240 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 DANCRP0C864 163 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 SLC25A16P16260 332 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 EPB42P16452 691 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 CD22P20273 847 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 NT5EP21589 574 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 CNTFP26441 200 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 DPP4P27487 766 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 KRT20P35900 424 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 GGT5P36269 586 aa6.88□□□□□ -1.31
PDPN-205ENST00000487038 PTGDSP41222 190 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms