RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ERP29P30040 261 aaKnown RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 CCR6P51684 374 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 WNT4P56705 351 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 RPA4Q13156 261 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 PIP5KL1Q5T9C9 394 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 RPTNQ6XPR3 784 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF730Q6ZMV8 503 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 GAREM2Q75VX8 874 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 RRM2BQ7LG56 351 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 DGLUCYQ7Z3D6 616 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ADGRF3Q8IZF5 1079 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 SAMD12Q8N8I0 201 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 OR8D4Q8NGM9 314 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 OR5AR1Q8NGP9 310 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 UFD1Q92890 307 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 C16orf58Q96GQ5 468 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 TM7SF3Q9NS93 570 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 HCFC1R1Q9NWW0 138 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 PCYT1BQ9Y5K3 369 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 A0A0A6YYJ9 748 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 E9PQ18 207 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM189-UBE2V1I3L0A0 370 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 SOCS6O14544 535 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 REM1O75628 298 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 GNSP15586 552 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 PRPH2P23942 346 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 LIMS1P48059 325 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 RFX3P48380 749 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 VSX2P58304 361 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 WDR5P61964 334 aaKnown RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 HYAL4Q2M3T9 481 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 KIF18BQ86Y91 864 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 SECISBP2Q96T21 854 aaKnown RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ZSCAN5AQ9BUG6 496 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 BHLHE41Q9C0J9 482 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 ZCCHC3Q9NUD5 404 aaKnown RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 RBFOX1Q9NWB1 397 aaKnown RBP11.69□□□□□ -0.54
HSPG2-211ENST00000486901 MAPRE3Q9UPY8 281 aa11.69□□□□□ -0.54
HSPG2-211ENST00000486901 PCP4L1A6NKN8 68 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 POM121CA8CG34 1229 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 AHRP35869 848 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 MTNR1AP48039 350 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ABATP80404 500 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 SLC3A1Q07837 685 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ARL9Q6T311 187 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 MSANTD1Q6ZTZ1 278 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 DDX53Q86TM3 631 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 NR2C2APQ86WQ0 139 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 OR11H4Q8NGC9 324 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 CEP76Q8TAP6 659 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 LRRC20Q8TCA0 184 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF431Q8TF32 576 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 COL26A1Q96A83 441 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 OR51I1Q9H343 314 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 SERHL2Q9H4I8 314 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 CCDC86Q9H6F5 360 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 SLC28A3Q9HAS3 691 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 GSTK1Q9Y2Q3 226 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ADAP00813 363 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 TBXA2RP21731 343 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 SHC1P29353 583 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ACVR1BP36896 505 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 CCT3P49368 545 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 PCBP3P57721 371 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 RPS7P62081 194 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ILKQ13418 452 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 PLEKHS1Q5SXH7 462 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 PMEPA1Q969W9 287 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 VOPP1Q96AW1 172 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 C12orf66Q96MD2 445 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 CERS4Q9HA82 394 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 LSM7Q9UK45 103 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 GPR55Q9Y2T6 319 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 IQCMA0A1B0GVH7 501 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 LEUTXA8MZ59 168 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 HMGN4O00479 90 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 MPZL2O60487 215 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 LIMS3P0CW19 117 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 LIMS4P0CW20 117 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 TFPIP10646 304 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 RPS5P46782 204 aaKnown RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF81P51508 661 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 CDH11P55287 796 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 DCDC1P59894 354 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 RRAS2P62070 204 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-211ENST00000486901 MZT2BQ6NZ67 158 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 GDPD4Q6W3E5 623 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 PRSS45Q7RTY3 260 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 C16orf62Q7Z3J2 963 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 C17orf62Q9BQA9 187 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 MED28Q9H204 178 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms