RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 FADDQ13158 208 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 DCTN2Q13561 401 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 DYRK1AQ13627 763 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 IL18Q14116 193 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 RBBP7Q16576 425 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 BCL7AQ4VC05 210 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 FAM76BQ5HYJ3 339 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 AARS2Q5JTZ9 985 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CLVS2Q5SYC1 327 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SPESP1Q6UW49 350 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 DET1Q7L5Y6 550 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 OVCH1Q7RTY7 1134 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 GLT6D1Q7Z4J2 308 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 LILRA2Q8N149 483 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF655Q8N720 491 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PQLC3Q8N755 202 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CATSPER1Q8NEC5 780 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF680Q8NEM1 530 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 OR52E1Q8NGJ3 308 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 OR6Y1Q8NGX8 325 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 HM13Q8TCT9 377 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ST7LQ8TDW4 575 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PAQR8Q8TEZ7 354 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 TADA1Q96BN2 335 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 FAF2Q96CS3 445 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 DCUN1D1Q96GG9 259 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ANKRD27Q96NW4 1050 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CDRT15Q96T59 188 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 PIP5K1AQ99755 562 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 KCNS3Q9BQ31 491 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 TUBB6Q9BUF5 446 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 RMND5AQ9H871 391 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 WDR54Q9H977 334 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 GLOD4Q9HC38 313 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 FAM60AQ9NP50 221 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SERHLQ9NQF3 203 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 IL17CQ9P0M4 197 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 DHCR7Q9UBM7 475 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SEC14L3Q9UDX4 400 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ASIC3Q9UHC3 531 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 NXT1Q9UKK6 140 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 CORO1CQ9ULV4 474 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ERVK-11Q9UQG0 969 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SLC22A14Q9Y267 594 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 ZNF281Q9Y2X9 895 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 HEY1Q9Y5J3 304 aa6.38□□□□□ -1.39
HDAC3-209ENST00000486618 NCOA6Q14686 2063 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 SNRNP200O75643 2136 aaKnown RBP6.38□□□□□ -1.39
HDAC3-209ENST00000486618 LOC105371267A0A1B0GV96 52 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 LOC285095A0A1B0GVY8 99 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 A0A1B0GX78 115 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 FAM234BA2RU67 622 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 GOLGA8KD6RF30 607 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 H3BMH7 237 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 STX7O15400 261 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 HCRTR2O43614 444 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 CLDN14O95500 239 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 MT-ATP6P00846 226 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 TGFAP01135 160 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 KRT8P05787 483 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 CALB2P22676 271 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 AHCYP23526 432 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 ADRA1DP25100 572 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 AOAHP28039 575 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SHMT2P34897 504 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 PGM1P36871 562 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 ALDH3B1P43353 468 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 GABRA4P48169 554 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 MTNR1BP49286 362 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 PCYT1AP49585 367 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 KHKP50053 298 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 NPY4RP50391 375 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 RAB1AP62820 205 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 PHC1P78364 1004 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SRSF2Q01130 221 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SF3A3Q12874 501 aaKnown RBP eCLIP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 GLE1Q53GS7 698 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 TEX44Q53QW1 395 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SPDYAQ5MJ70 313 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 TTC23LQ6PF05 361 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 KIRREL2Q6UWL6 708 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 BIVMQ86UB2 503 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 C10orf67Q8IYJ2 551 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 ADGRF3Q8IZF5 1079 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SLC25A41Q8N5S1 370 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 TRPV3Q8NET8 790 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SPATA22Q8NHS9 363 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SUN3Q8TAQ9 357 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 BLOC1S5Q8TDH9 187 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 ACTRT2Q8TDY3 377 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 HEXDCQ8WVB3 486 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 LIPHQ8WWY8 451 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SLAMF9Q96A28 289 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 MTFMTQ96DP5 389 aaKnown RBP6.37□□□□□ -1.39
HDAC3-209ENST00000486618 RNF157Q96PX1 679 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 SSX3Q99909 188 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 FERMT1Q9BQL6 677 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 ASB8Q9H765 288 aa6.37□□□□□ -1.39
HDAC3-209ENST00000486618 MCCC2Q9HCC0 563 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms