RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SSR4P51571 173 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 WNT3P56703 355 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 MLF1P58340 268 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 HBA1P69905 142 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 OC90Q02509 493 aaPredicted RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 RCAN2Q14206 197 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 VPS26BQ4G0F5 336 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 LACTB2Q53H82 288 aaPredicted RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 FHL5Q5TD97 284 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 BLOC1S3Q6QNY0 202 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ANGPTL8Q6UXH0 198 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 TMEM64Q6YI46 380 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 GK5Q6ZS86 529 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 HPS6Q86YV9 775 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 BEST3Q8N1M1 668 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 CPSF7Q8N684 471 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 AMER2Q8N7J2 671 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ZNF615Q8N8J6 731 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 OR5AK3PQ8NH89 298 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ASB15Q8WXK1 588 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 PSMF1Q92530 271 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 JADE3Q92613 823 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 VPS33AQ96AX1 596 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 FAM120BQ96EK7 910 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 CCDC115Q96NT0 180 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 LMF1Q96S06 567 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 UBL7Q96S82 380 aaPredicted RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 SMAD5Q99717 465 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 UTP23Q9BRU9 249 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 ITPAQ9BY32 194 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ZNF385DQ9H6B1 395 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 CXorf36Q9H7Y0 433 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ANKRA2Q9H9E1 313 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 LIN28AQ9H9Z2 209 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 FOLH1BQ9HBA9 442 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 SAR1AQ9NR31 198 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 MYOTQ9UBF9 498 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 FAF1Q9UNN5 650 aaPredicted RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 TP53TG5Q9Y2B4 290 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 YARS2Q9Y2Z4 477 aaKnown RBP10.56□□□□□ -0.72
NUP50-216ENST00000486184 OR10H1Q9Y4A9 318 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 ZFHX4Q86UP3 3567 aa10.56□□□□□ -0.72
NUP50-216ENST00000486184 TTC36A6NLP5 189 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 SLC22A2O15244 555 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 PRKNO60260 465 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 ERN1O75460 977 aaKnown RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 DCTN3O75935 186 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 OR2J2O76002 312 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 CLPSP04118 112 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 SNRPB2P08579 225 aaKnown RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 UQCRC2P22695 453 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 ADSLP30566 484 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 KRT20P35900 424 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 TMED10P49755 219 aaKnown RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 EMDP50402 254 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 NR0B1P51843 470 aaKnown RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 PSPHP78330 225 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 PHC1P78364 1004 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 NNATQ16517 81 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 MMEL1Q495T6 779 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 OPN5Q6U736 354 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 DNAJC14Q6Y2X3 702 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 ZNF621Q6ZSS3 439 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 ASB18Q6ZVZ8 466 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 SLC15A4Q8N697 577 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 HORMAD2Q8N7B1 307 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 ANKS4BQ8N8V4 417 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 CDRT4Q8N9R6 151 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 C17orf47Q8NEP4 570 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 PSMA8Q8TAA3 256 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 TP53INP1Q96A56 240 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 LCORQ96JN0 433 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 SLC35G5Q96KT7 338 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 SLC35A5Q9BS91 424 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 NMUR2Q9GZQ4 415 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.55□□□□□ -0.72
NUP50-216ENST00000486184 ZNF71Q9NQZ8 489 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 SIRT3Q9NTG7 399 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 LEF1Q9UJU2 399 aaPredicted RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 ERVK-11Q9UQG0 969 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 NDUFAF1Q9Y375 327 aa10.55□□□□□ -0.72
NUP50-216ENST00000486184 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
NUP50-216ENST00000486184 A0A1W2PP18 115 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 FRG2CA6NGY1 282 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 A8MVJ9 347 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 CAPN14A8MX76 684 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 CDK2AP1O14519 115 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 NDUFAB1O14561 156 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 ACOX3O15254 700 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 SCN2BO60939 215 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 KCNH1O95259 989 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 WDPCPO95876 746 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 ALOX5P09917 674 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 PPICP45877 212 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 ZFP36L2P47974 494 aaKnown RBP10.54□□□□□ -0.72
NUP50-216ENST00000486184 TRPC1P48995 793 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 CYB561P49447 251 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 ANXA11P50995 505 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms