RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CTRB1P17538 263 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 G6PCP35575 357 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CRKLP46109 303 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 PSMD8P48556 350 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SEPHS1P49903 392 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 KCNC4Q03721 635 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SLC18A2Q05940 514 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 JOSD1Q15040 202 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 AMZ1Q400G9 498 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 UBAP2Q5T6F2 1119 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 PRAMEF20Q5VT98 475 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CTRB2Q6GPI1 263 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SVBPQ8N300 66 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 DUS3LQ96G46 650 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 MIEN1Q9BRT3 115 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 KATNB1Q9BVA0 655 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TMEM59Q9BXS4 323 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CNTNAP3Q9BZ76 1288 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 DDX47Q9H0S4 455 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 ABHD16BQ9H3Z7 469 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SLC2A9Q9NRM0 540 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TAS2R14Q9NYV8 317 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 LGALS13Q9UHV8 139 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 LIPT1Q9Y234 373 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 NOSIPQ9Y314 301 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 PCF11O94913 1555 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 CXCL11O14625 94 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SORBS2O94875 1100 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 CER1O95813 267 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF28P17035 718 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TFEBP19484 476 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 STAC2Q6ZMT1 411 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 FBXO16Q8IX29 292 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 PHTF2Q8N3S3 785 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 IL22RA1Q8N6P7 574 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CMTM7Q96FZ5 175 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ATG101Q9BSB4 218 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TMEM109Q9BVC6 243 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 DUSP23Q9BVJ7 150 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TPSD1Q9BZJ3 242 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 L2HGDHQ9H9P8 463 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 RCL1Q9Y2P8 373 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 PTPRMP28827 1452 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 F5H0A9 414 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 CAMTA2O94983 1202 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ARHGEF15O94989 841 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 HOXA11P31270 313 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 ARSFP54793 590 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 TUSC3Q13454 348 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SLC14A2Q15849 920 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 MPEG1Q2M385 716 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF718Q3SXZ3 478 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 GAREM2Q75VX8 874 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CCDC116Q8IYX3 515 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 FBXO15Q8NCQ5 510 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 SIMC1Q8NDZ2 872 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 KCNJ15Q99712 375 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 HES4Q9HCC6 221 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF727A8MUV8 499 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 STK16O75716 305 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 PFKMP08237 780 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 G6PDP11413 515 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 RPS5P46782 204 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF74Q16587 644 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 BTNL8Q6UX41 500 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF600Q6ZNG1 722 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 PIWIL3Q7Z3Z3 882 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 AMZ2Q86W34 360 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SYNPOQ8N3V7 929 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ZNF781Q8N8C0 355 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 MARCH10Q8NA82 808 aaPredicted RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 OR4A16Q8NH70 328 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 SLC13A3Q8WWT9 602 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 CELF1Q92879 486 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 FAM46AQ96IP4 442 aaKnown RBP5.2□□□□□ -1.58
USF3-202ENST00000478658 MXRA8Q9BRK3 442 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 AGPAT4Q9NRZ5 378 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 NINJ2Q9NZG7 142 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 KLHL9Q9P2J3 617 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 ARAP3Q8WWN8 1544 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 MYO7AQ13402 2215 aa5.2□□□□□ -1.58
USF3-202ENST00000478658 RPS10-NUDT3A0A1W2PQS6 291 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 PGCP20142 388 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CYP2B6P20813 491 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ARNTP27540 789 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 HSPA7P48741 367 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 OR2B6P58173 313 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 MAP1SQ66K74 1059 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 FAM117BQ6P1L5 589 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 ASB9Q96DX5 294 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 AURKBQ96GD4 344 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 OR51J1Q9H342 316 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 DDX31Q9H8H2 851 aaKnown RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 FAM212BQ9NTI7 297 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 ZNF701Q9NV72 531 aaPredicted RBP5.19□□□□□ -1.58
USF3-202ENST00000478658 PTTG3PQ9NZH4 202 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 FTSJ1Q9UET6 329 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 TESMINQ9Y4I5 508 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 IGSF1Q8N6C5 1336 aa5.19□□□□□ -1.58
USF3-202ENST00000478658 CDHR4A6H8M9 788 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms