RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 PLEKHA6Q9Y2H5 1048 aa11.85□□□□□ -0.51
ABCF3-212ENST00000478288 SLC6A5Q9Y345 797 aa11.85□□□□□ -0.51
ABCF3-212ENST00000478288 PCDHA9Q9Y5H5 950 aa11.85□□□□□ -0.51
ABCF3-212ENST00000478288 TO15178 435 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 KLK1P06870 262 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 COL6A2P12110 1019 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 NT5EP21589 574 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 NAGLUP54802 743 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 WNT3P56703 355 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 TRA2BP62995 288 aaKnown RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 EEF1A1P68104 462 aaKnown RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 MGAT2Q10469 447 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 FOXD4Q12950 439 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 TRADDQ15628 312 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 DCST1Q5T197 706 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 EEF1A1P5Q5VTE0 462 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 COMMD6Q7Z4G1 85 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 ADGRE4PQ86SQ3 457 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 PLD6Q8N2A8 252 aaKnown RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 ERP27Q96DN0 273 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 DTNBP1Q96EV8 351 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 LCORQ96JN0 433 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 TRIB1Q96RU8 372 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 OSBPL11Q9BXB4 747 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 C1QTNF3Q9BXJ4 246 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 MRPL1Q9BYD6 325 aaKnown RBP11.84□□□□□ -0.51
ABCF3-212ENST00000478288 OR2B2Q9GZK3 357 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 ACBD3Q9H3P7 528 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 ELOVL6Q9H5J4 265 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 ZBTB26Q9HCK0 441 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 ZDHHC18Q9NUE0 388 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 MAT2BQ9NZL9 334 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 PRODH2Q9UF12 536 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 PSME2Q9UL46 239 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 DTX4Q9Y2E6 619 aa11.84□□□□□ -0.51
ABCF3-212ENST00000478288 DIAPH2O60879 1101 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 ABCB7O75027 752 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 SMIM24O75264 130 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 CBR3O75828 277 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 ATE1O95260 518 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 CBX7O95931 251 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 OTCP00480 354 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 RPS17P08708 135 aaKnown RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 CYP4B1P13584 511 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 DRD5P21918 477 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 ARL1P40616 181 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 PTGDSP41222 190 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 PCYT1AP49585 367 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 DGKQP52824 942 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 ADAM8P78325 824 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 GALNT1Q10472 559 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 TOMM20Q15388 145 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 WIPI1Q5MNZ9 446 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 ANGPTL8Q6UXH0 198 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 PRR22Q8IZ63 422 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 GBP7Q8N8V2 638 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 SLC44A1Q8WWI5 657 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 OMA1Q96E52 524 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 PHF21BQ96EK2 531 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 DACH2Q96NX9 599 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 TM9SF2Q99805 663 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 ITPAQ9BY32 194 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 VPS11Q9H270 941 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 PLEKHF2Q9H8W4 249 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 XPR1Q9UBH6 696 aa11.83□□□□□ -0.52
ABCF3-212ENST00000478288 EXO1Q9UQ84 846 aaKnown RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 RPH3AQ9Y2J0 694 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-212ENST00000478288 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 DNHD1Q96M86 4753 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 FRG2CA6NGY1 282 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 OR6C70A6NIJ9 312 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 CLCA1A8K7I4 914 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 EEF1E1-BLOC1S5C9J1V9 151 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 GNB5O14775 395 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 EEF1E1O43324 174 aaKnown RBP11.82□□□□□ -0.52
ABCF3-212ENST00000478288 ICOSLGO75144 302 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 ERN1O75460 977 aaKnown RBP11.82□□□□□ -0.52
ABCF3-212ENST00000478288 BCAS2O75934 225 aaPredicted RBP11.82□□□□□ -0.52
ABCF3-212ENST00000478288 RCBTB2O95199 551 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 TMIGD3P0DMS9 266 aaPredicted RBP11.82□□□□□ -0.52
ABCF3-212ENST00000478288 CHMP24386 653 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 CNTFP26441 200 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 CASQ1P31415 396 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
ABCF3-212ENST00000478288 SOX18P35713 384 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 PPICP45877 212 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 SERPINB9P50453 376 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 GFRA1P56159 465 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 PLCXD2Q0VAA5 305 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 UAP1Q16222 522 aaPredicted RBP11.82□□□□□ -0.52
ABCF3-212ENST00000478288 DEFB113Q30KQ7 82 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 ENPP6Q6UWR7 440 aa11.82□□□□□ -0.52
ABCF3-212ENST00000478288 TAOK1Q7L7X3 1001 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms