RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TPT1P8Q9HAU6 139 aa15.04■□□□□ -0
VHL-203ENST00000477538 GPATCH2Q9NW75 528 aa15.04■□□□□ -0
VHL-203ENST00000477538 PRODH2Q9UF12 536 aa15.04■□□□□ -0
VHL-203ENST00000477538 ZNF223Q9UK11 482 aaPredicted RBP15.04■□□□□ -0
VHL-203ENST00000477538 CFL2Q9Y281 166 aa15.04■□□□□ -0
VHL-203ENST00000477538 HEMK1Q9Y5R4 338 aaPredicted RBP15.04■□□□□ -0
VHL-203ENST00000477538 CNTRLQ7Z7A1 2325 aa15.04■□□□□ -0
VHL-203ENST00000477538 ARGFXA6NJG6 315 aa15.03■□□□□ -0
VHL-203ENST00000477538 OR6C76A6NM76 312 aa15.03■□□□□ -0
VHL-203ENST00000477538 CLIC1O00299 241 aa15.03■□□□□ -0
VHL-203ENST00000477538 NME6O75414 186 aaPredicted RBP15.03■□□□□ -0
VHL-203ENST00000477538 C1QCP02747 245 aa15.03■□□□□ -0
VHL-203ENST00000477538 HMGN2P05204 90 aaKnown RBP15.03■□□□□ -0
VHL-203ENST00000477538 KRT16P08779 473 aa15.03■□□□□ -0
VHL-203ENST00000477538 PPIBP23284 216 aaKnown RBP15.03■□□□□ -0
VHL-203ENST00000477538 PRIM2P49643 509 aa15.03■□□□□ -0
VHL-203ENST00000477538 RRADP55042 308 aa15.03■□□□□ -0
VHL-203ENST00000477538 AP2B1P63010 937 aa15.03■□□□□ -0
VHL-203ENST00000477538 Q0VFX4 171 aa15.03■□□□□ -0
VHL-203ENST00000477538 AIMP2Q13155 320 aaKnown RBP15.03■□□□□ -0
VHL-203ENST00000477538 LASP1Q14847 261 aaKnown RBP15.03■□□□□ -0
VHL-203ENST00000477538 RUNDC3AQ59EK9 446 aa15.03■□□□□ -0
VHL-203ENST00000477538 MFSD12Q6NUT3 480 aa15.03■□□□□ -0
VHL-203ENST00000477538 HSDL2Q6YN16 418 aa15.03■□□□□ -0
VHL-203ENST00000477538 SLC29A4Q7RTT9 530 aa15.03■□□□□ -0
VHL-203ENST00000477538 C9orf40Q8IXQ3 194 aa15.03■□□□□ -0
VHL-203ENST00000477538 KBTBD2Q8IY47 623 aa15.03■□□□□ -0
VHL-203ENST00000477538 TMEM102Q8N9M5 508 aaPredicted RBP15.03■□□□□ -0
VHL-203ENST00000477538 FBXO27Q8NI29 283 aa15.03■□□□□ -0
VHL-203ENST00000477538 PNPT1Q8TCS8 783 aaKnown RBP15.03■□□□□ -0
VHL-203ENST00000477538 ANKRD27Q96NW4 1050 aa15.03■□□□□ -0
VHL-203ENST00000477538 CPPED1Q9BRF8 314 aaPredicted RBP15.03■□□□□ -0
VHL-203ENST00000477538 FOLH1BQ9HBA9 442 aa15.03■□□□□ -0
VHL-203ENST00000477538 FAF1Q9UNN5 650 aaPredicted RBP15.03■□□□□ -0
VHL-203ENST00000477538 DTX4Q9Y2E6 619 aa15.03■□□□□ -0
VHL-203ENST00000477538 TNRC6AQ8NDV7 1962 aaKnown RBP15.03■□□□□ -0
VHL-203ENST00000477538 B2RBV5 119 aa15.02■□□□□ -0
VHL-203ENST00000477538 TAF4O00268 1085 aa15.02■□□□□ -0
VHL-203ENST00000477538 UNC5CO95185 931 aa15.02■□□□□ -0
VHL-203ENST00000477538 SERPINA7P05543 415 aa15.02■□□□□ -0
VHL-203ENST00000477538 CASP9P55211 416 aa15.02■□□□□ -0
VHL-203ENST00000477538 RPS26P62854 115 aaKnown RBP15.02■□□□□ -0
VHL-203ENST00000477538 RNF4P78317 190 aa15.02■□□□□ -0
VHL-203ENST00000477538 BNIP1Q12981 228 aa15.02■□□□□ -0
VHL-203ENST00000477538 MYBPC3Q14896 1274 aa15.02■□□□□ -0
VHL-203ENST00000477538 EBPQ15125 230 aaKnown RBP15.02■□□□□ -0
VHL-203ENST00000477538 RNF130Q86XS8 419 aa15.02■□□□□ -0
VHL-203ENST00000477538 CLEC1AQ8NC01 280 aa15.02■□□□□ -0
VHL-203ENST00000477538 OR8K3Q8NH51 312 aa15.02■□□□□ -0
VHL-203ENST00000477538 JADE3Q92613 823 aa15.02■□□□□ -0
VHL-203ENST00000477538 C16orf58Q96GQ5 468 aa15.02■□□□□ -0
VHL-203ENST00000477538 VSTM2LQ96N03 204 aa15.02■□□□□ -0
VHL-203ENST00000477538 GAL3ST4Q96RP7 486 aa15.02■□□□□ -0
VHL-203ENST00000477538 YIPF4Q9BSR8 244 aa15.02■□□□□ -0
VHL-203ENST00000477538 ITPAQ9BY32 194 aa15.02■□□□□ -0
VHL-203ENST00000477538 DEFB126Q9BYW3 111 aa15.02■□□□□ -0
VHL-203ENST00000477538 TRIM8Q9BZR9 551 aa15.02■□□□□ -0
VHL-203ENST00000477538 RAD21L1Q9H4I0 556 aa15.02■□□□□ -0
VHL-203ENST00000477538 SERHL2Q9H4I8 314 aa15.02■□□□□ -0
VHL-203ENST00000477538 ATP13A2Q9NQ11 1180 aa15.02■□□□□ -0
VHL-203ENST00000477538 NDE1Q9NXR1 346 aa15.02■□□□□ -0
VHL-203ENST00000477538 CORO2BQ9UQ03 480 aa15.02■□□□□ -0
VHL-203ENST00000477538 C15orf38-AP3S2A0A0A6YYH1 394 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 C2orf92A0A1B0GVN3 265 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 EVPLLA8MZ36 301 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 PRKNO60260 465 aaPredicted RBP15.01□□□□□ -0.01
VHL-203ENST00000477538 ZFAND5O76080 213 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 ITGAMP11215 1152 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 MATN1P21941 496 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 SLC6A2P23975 617 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 ITPKBP27987 946 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 KHKP50053 298 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 UCNP55089 124 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 TMPRSS3P57727 454 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 MTPNP58546 118 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 PSME3P61289 254 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 SLC25A3Q00325 362 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 VAC14Q08AM6 782 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 SELPLGQ14242 412 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 ZNHIT3Q15649 155 aaPredicted RBP15.01□□□□□ -0.01
VHL-203ENST00000477538 DEFB109BQ30KR1 87 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 COX20Q5RI15 118 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.01□□□□□ -0.01
VHL-203ENST00000477538 HLA-DQA1Q5Y7H0 255 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 NANOGP8Q6NSW7 305 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 CDC73Q6P1J9 531 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 C8orf82Q6P1X6 216 aaPredicted RBP15.01□□□□□ -0.01
VHL-203ENST00000477538 ZCCHC12Q6PEW1 402 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 RINLQ6ZS11 566 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 CCDC121Q6ZUS5 278 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 GPR155Q7Z3F1 870 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 WDR53Q7Z5U6 358 aaPredicted RBP15.01□□□□□ -0.01
VHL-203ENST00000477538 ARPINQ7Z6K5 226 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 CDRT4Q8N9R6 151 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 RBM15BQ8NDT2 890 aaKnown RBP15.01□□□□□ -0.01
VHL-203ENST00000477538 OR8J3Q8NGG0 315 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 OR52N2Q8NGI0 321 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 FBXO30Q8TB52 745 aa15.01□□□□□ -0.01
VHL-203ENST00000477538 THOC3Q96J01 351 aaKnown RBP15.01□□□□□ -0.01
VHL-203ENST00000477538 HOPXQ9BPY8 73 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms