RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	AGO4	Q9HCK5	861 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	HEBP1	Q9NRV9	189 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	DUSP22	Q9NRW4	184 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	C19orf12	Q9NSK7	152 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PIH1D1	Q9NWS0	290 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CLN6	Q9NWW5	311 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	HECA	Q9UBI9	543 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	SEC14L3	Q9UDX4	400 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	OGDHL	Q9ULD0	1010 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	SCML1	Q9UN30	329 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CRYL1	Q9Y2S2	319 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	MED16	Q9Y2X0	877 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	AAR2	Q9Y312	384 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZSWIM8	A7E2V4	1837 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRAMEF33	A0A0G2JMD5	474 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	LOC285095	A0A1B0GVY8	99 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520		A0A1W2PQL4	384 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBA6	A0AVT1	1052 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMEM218	A2RU14	115 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520		H7BY64	318 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520		L7N2F9	121 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	DFFA	O00273	331 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CXCR6	O00574	342 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPP6C	O00743	305 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBE2C	O00762	179 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRAMEF10	O60809	474 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	WBP4	O75554	376 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CREG1	O75629	220 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	RP2	O75695	350 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	IFNA2	P01563	188 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	EPO	P01588	193 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CKM	P06732	381 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CHRM5	P08912	532 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ALDOC	P09972	364 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	UROS	P10746	265 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	HGF	P14210	728 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CPN1	P15169	458 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	GNS	P15586	552 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPP3CB	P16298	524 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	RAB3B	P20337	219 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PAICS	P22234	425 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CYP2F1	P24903	491 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	FGF9	P31371	208 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPS19	P39019	145 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	MNDA	P41218	407 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ADCYAP1R1	P41586	468 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC1A3	P43003	542 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	EVX1	P49640	407 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	LIG4	P49917	911 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	HNMT	P50135	292 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CLCN4	P51793	760 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	RIDA	P52758	137 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	NUDT6	P53370	316 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SESN2	P58004	480 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	CDC42	P60953	191 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPS7	P62081	194 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	DCD	P81605	110 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PITPNA	Q00169	270 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	IRF9	Q00978	393 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SSX2	Q16385	188 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SNAPC1	Q16533	368 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRSS53	Q2L4Q9	553 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	MPEG1	Q2M385	716 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SMTNL2	Q2TAL5	461 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	HFE	Q30201	348 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF528	Q3MIS6	628 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	TTLL9	Q3SXZ7	439 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ATP6AP1L	Q52LC2	224 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLA1A	Q53H76	456 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PAN3	Q58A45	887 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRAMEF19	Q5SWL8	479 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF678	Q5SXM1	525 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	TSTD2	Q5T7W7	516 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC22A10	Q63ZE4	541 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLAG1	Q6DJT9	500 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	VASN	Q6EMK4	673 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	NOTUM	Q6P988	496 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF549	Q6P9A3	640 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	HAGHL	Q6PII5	290 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PAMR1	Q6UXH9	720 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	NPNT	Q6UXI9	565 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMPRSS11F	Q6ZWK6	438 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	USP53	Q70EK8	1073 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	DET1	Q7L5Y6	550 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SSX9	Q7RTT3	188 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	TSPAN33	Q86UF1	283 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZDHHC21	Q8IVQ6	265 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	ENTHD1	Q8IYW4	607 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC34A3	Q8N130	599 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC43A2	Q8N370	569 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMEM132C	Q8N3T6	1108 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SPATA6L	Q8N4H0	392 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	WDTC1	Q8N5D0	677 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	SPIC	Q8N5J4	248 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	STPG3	Q8N7X2	389 aa		4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCSK9	Q8NBP7	692 aa	Known RBP	4.45	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM71C	Q8NEG0	241 aa		4.45	□□□□□ -1.7

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