RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 KAT2AQ92830 837 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 SECISBP2Q96T21 854 aaKnown RBP13.33□□□□□ -0.28
ABCF3-211ENST00000475728 FAM173AQ9BQD7 235 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 C1orf50Q9BV19 199 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 GLIPR2Q9H4G4 154 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 ACSS1Q9NUB1 689 aaPredicted RBP13.33□□□□□ -0.28
ABCF3-211ENST00000475728 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
ABCF3-211ENST00000475728 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 ATP6V1HQ9UI12 483 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 NPFFR2Q9Y5X5 522 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 FLNCQ14315 2725 aa13.33□□□□□ -0.28
ABCF3-211ENST00000475728 FRG2CA6NGY1 282 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 TTC36A6NLP5 189 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 ACOT7O00154 380 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
ABCF3-211ENST00000475728 HDAC3O15379 428 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 PTGER1P34995 402 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 GPC1P35052 558 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 UQCRFS1P47985 274 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 EMDP50402 254 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 TDGF1P3P51864 188 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 MANFP55145 182 aaKnown RBP13.32□□□□□ -0.28
ABCF3-211ENST00000475728 MRPL49Q13405 166 aaKnown RBP13.32□□□□□ -0.28
ABCF3-211ENST00000475728 RPS6KA2Q15349 733 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 FHL5Q5TD97 284 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 GFRALQ6UXV0 394 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 FAM47EQ6ZV65 393 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 FBXW8Q8N3Y1 598 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 CPSF7Q8N684 471 aaKnown RBP13.32□□□□□ -0.28
ABCF3-211ENST00000475728 OR2M7Q8NG81 312 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 PAQR8Q8TEZ7 354 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 BTBD9Q96Q07 612 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 ITPAQ9BY32 194 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 NUF2Q9BZD4 464 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 NXF5Q9H1B4 397 aaKnown RBP13.32□□□□□ -0.28
ABCF3-211ENST00000475728 AKTIPQ9H8T0 292 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 MEAF6Q9HAF1 191 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 PNPOQ9NVS9 261 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 GIMAP2Q9UG22 337 aa13.32□□□□□ -0.28
ABCF3-211ENST00000475728 C19orf53Q9UNZ5 99 aaPredicted RBP13.32□□□□□ -0.28
ABCF3-211ENST00000475728 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 TFECO14948 347 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 TO15178 435 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ZNF354AO60765 605 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ERN1O75460 977 aaKnown RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 LBPP18428 481 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 MST1P26927 711 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ABCD3P28288 659 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 KRT20P35900 424 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 MC3RP41968 323 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 FRKP42685 505 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 C21orf58P58505 322 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 GPR85P60893 370 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 MRPS22P82650 360 aaKnown RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 OCRLQ01968 901 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 PLGLB1Q02325 96 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 PLCXD2Q0VAA5 305 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ZNF155Q12901 538 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 DUSP8Q13202 625 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ZNHIT3Q15649 155 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 TTMPQ5BVD1 217 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 CPTPQ5TA50 214 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 SLC34A3Q8N130 599 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 OR2L13Q8N349 312 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 FAM26EQ8N5C1 309 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 OR7G2Q8NG99 324 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 CEP70Q8NHQ1 597 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 PRR7Q8TB68 274 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 LRRC8CQ8TDW0 803 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 DYDC1Q8WWB3 177 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ZNF75CPQ92670 426 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 ELP4Q96EB1 424 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 PPP1R36Q96LQ0 422 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 GPR137Q96N19 417 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 C3orf14Q9HBI5 128 aa13.31□□□□□ -0.28
ABCF3-211ENST00000475728 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 GPR55Q9Y2T6 319 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-211ENST00000475728 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 ASNA1O43681 348 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 ABCB7O75027 752 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 PPM1BO75688 479 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 UNC5CO95185 931 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 CCL3P10147 92 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 G6PDP11413 515 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 SOX18P35713 384 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 CLDN8P56748 225 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 PPP2R2AP63151 447 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 KCNJ2P63252 427 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 HSPB3Q12988 150 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 PTGR1Q14914 329 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 MLC1Q15049 377 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 PRSS53Q2L4Q9 553 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 EIF2S3LQ2VIR3 472 aaKnown RBP13.3□□□□□ -0.28
ABCF3-211ENST00000475728 LSM12Q3MHD2 195 aaKnown RBP13.3□□□□□ -0.28
ABCF3-211ENST00000475728 OGFOD2Q6N063 350 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 ANKRD26P1Q6NSI1 321 aa13.3□□□□□ -0.28
ABCF3-211ENST00000475728 PAOXQ6QHF9 649 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms