RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 EXOSC6Q5RKV6 272 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 FRG2Q64ET8 278 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SUSD1Q6UWL2 747 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CLEC17AQ6ZS10 378 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MOB1BQ7L9L4 216 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM150AQ86TG1 271 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM104Q8NE00 496 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DMBX1Q8NFW5 382 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PLEKHO2Q8TD55 490 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SLC5A11Q8WWX8 675 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DEDD2Q8WXF8 326 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 FRG2BQ96QU4 278 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CGREF1Q99674 301 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SPIN2AQ99865 258 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SPIN2BQ9BPZ2 258 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SLC32A1Q9H598 525 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 KCNK13Q9HB14 408 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 WDR6Q9NNW5 1121 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF207O43670 478 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DFNA5O60443 496 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MMP3P08254 477 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 LIPCP11150 499 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CREB1P16220 341 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 NRIP1P48552 1158 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ACTC1P68032 377 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ACTA1P68133 377 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CRYZQ08257 329 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SNTB2Q13425 540 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 KCNJ11Q14654 390 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ATG9BQ674R7 924 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SLC18B1Q6NT16 456 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 XKR5Q6UX68 686 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DCP2Q8IU60 420 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 EGFL6Q8IUX8 553 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 KREMEN2Q8NCW0 462 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OR2T33Q8NG76 320 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CNIH3Q8TBE1 160 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 WFIKKN2Q8TEU8 576 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CANT1Q8WVQ1 401 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MAL2Q969L2 176 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF514Q96K75 400 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 FAM71F1Q96KD3 344 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 RIOX1Q9H6W3 641 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MTCH1Q9NZJ7 389 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PRODH2Q9UF12 536 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TRAV18A0A075B6X5 111 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 A0A1W2PRU2 124 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 AGAP14A8MT82 685 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FSCN2O14926 492 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CREG1O75629 220 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DBHP09172 617 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CBR1P16152 277 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FPR1P21462 350 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PRKACBP22694 351 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PREPP48147 710 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 YBEYP58557 167 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RAB15P59190 212 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 AKR1C1Q04828 323 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CXCL9Q07325 125 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TDGQ13569 410 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CHRNA6Q15825 494 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MOGQ16653 247 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PDLIM3Q53GG5 364 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM198Q66K66 360 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 NRROSQ86YC3 692 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TICAM1Q8IUC6 712 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FITM2Q8N6M3 262 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GLIS3Q8NEA6 775 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 IRGQQ8WZA9 623 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FKBP10Q96AY3 582 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RNF32Q9H0A6 362 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLC38A1Q9H2H9 487 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ZFP57Q9NU63 452 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLC17A6Q9P2U8 582 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLC23A2Q9UGH3 650 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ABCA3Q99758 1704 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DLC1Q96QB1 1528 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 LOC105369274A0A096LPK9 316 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RAB27BO00194 218 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OXSR1O95747 527 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A6P0DMU7 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A5P0DMU8 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A7P0DMV0 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A8P0DMV1 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A9P0DMV2 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GAAP10253 952 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DRD5P21918 477 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SOX9P48436 509 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RAB7AP51149 207 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RPS18P62269 152 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 YIF1BQ5BJH7 314 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A2Q5DJT8 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A1Q5HYN5 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RAB41Q5JT25 222 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PLAC9Q5JTB6 97 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FCRLBQ6BAA4 426 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OR4N4Q8N0Y3 316 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms