RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 NOMO1Q15155 1222 aa2.53□□□□□ -2
CD46-210ENST00000462968 TERF2Q15554 542 aa2.53□□□□□ -2
CD46-210ENST00000462968 DPYSL2Q16555 572 aa2.53□□□□□ -2
CD46-210ENST00000462968 EXOC3L4Q17RC7 722 aa2.53□□□□□ -2
CD46-210ENST00000462968 IQCCQ4KMZ1 466 aa2.53□□□□□ -2
CD46-210ENST00000462968 DNAJC21Q5F1R6 531 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 CCDC122Q5T0U0 273 aa2.53□□□□□ -2
CD46-210ENST00000462968 NCMAPQ5T1S8 102 aa2.53□□□□□ -2
CD46-210ENST00000462968 KPRPQ5T749 579 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 PXDC1Q5TGL8 231 aa2.53□□□□□ -2
CD46-210ENST00000462968 ZNF658Q5TYW1 1059 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 SLC22A10Q63ZE4 541 aa2.53□□□□□ -2
CD46-210ENST00000462968 OR2A2Q6IF42 318 aa2.53□□□□□ -2
CD46-210ENST00000462968 DNAJC24Q6P3W2 148 aa2.53□□□□□ -2
CD46-210ENST00000462968 DCUN1D2Q6PH85 259 aa2.53□□□□□ -2
CD46-210ENST00000462968 SHQ1Q6PI26 577 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 OPN5Q6U736 354 aa2.53□□□□□ -2
CD46-210ENST00000462968 UGT2A3Q6UWM9 527 aa2.53□□□□□ -2
CD46-210ENST00000462968 CCBE1Q6UXH8 406 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 GLT6D1Q7Z4J2 308 aa2.53□□□□□ -2
CD46-210ENST00000462968 KIAA1328Q86T90 577 aa2.53□□□□□ -2
CD46-210ENST00000462968 DCUN1D3Q8IWE4 304 aa2.53□□□□□ -2
CD46-210ENST00000462968 SVOPLQ8N434 492 aa2.53□□□□□ -2
CD46-210ENST00000462968 RAB42Q8N4Z0 105 aa2.53□□□□□ -2
CD46-210ENST00000462968 TEX29Q8N6K0 151 aa2.53□□□□□ -2
CD46-210ENST00000462968 CNTD1Q8N815 330 aa2.53□□□□□ -2
CD46-210ENST00000462968 ZDHHC22Q8N966 263 aa2.53□□□□□ -2
CD46-210ENST00000462968 ZNF610Q8N9Z0 462 aa2.53□□□□□ -2
CD46-210ENST00000462968 SYT14Q8NB59 555 aa2.53□□□□□ -2
CD46-210ENST00000462968 ZNF540Q8NDQ6 660 aa2.53□□□□□ -2
CD46-210ENST00000462968 TOR1AIP2Q8NFQ8 470 aa2.53□□□□□ -2
CD46-210ENST00000462968 OR2A1Q8NGT9 310 aa2.53□□□□□ -2
CD46-210ENST00000462968 HMGCLL1Q8TB92 370 aa2.53□□□□□ -2
CD46-210ENST00000462968 KCTD4Q8WVF5 259 aa2.53□□□□□ -2
CD46-210ENST00000462968 GTF3AQ92664 365 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 HTRA1Q92743 480 aa2.53□□□□□ -2
CD46-210ENST00000462968 ABTB1Q969K4 478 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 TADA1Q96BN2 335 aa2.53□□□□□ -2
CD46-210ENST00000462968 C3orf49Q96BT1 292 aa2.53□□□□□ -2
CD46-210ENST00000462968 TBC1D20Q96BZ9 403 aa2.53□□□□□ -2
CD46-210ENST00000462968 IMP4Q96G21 291 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 VMP1Q96GC9 406 aa2.53□□□□□ -2
CD46-210ENST00000462968 JSRP1Q96MG2 331 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 IL17FQ96PD4 163 aa2.53□□□□□ -2
CD46-210ENST00000462968 PEBP4Q96S96 227 aa2.53□□□□□ -2
CD46-210ENST00000462968 TUBA1CQ9BQE3 449 aa2.53□□□□□ -2
CD46-210ENST00000462968 PIMREGQ9BSJ6 248 aa2.53□□□□□ -2
CD46-210ENST00000462968 FICDQ9BVA6 458 aa2.53□□□□□ -2
CD46-210ENST00000462968 CACNG6Q9BXT2 260 aa2.53□□□□□ -2
CD46-210ENST00000462968 UGT2B28Q9BY64 529 aa2.53□□□□□ -2
CD46-210ENST00000462968 OPN3Q9H1Y3 402 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 CDC42EP4Q9H3Q1 356 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 MS4A5Q9H3V2 200 aa2.53□□□□□ -2
CD46-210ENST00000462968 ARNT2Q9HBZ2 717 aa2.53□□□□□ -2
CD46-210ENST00000462968 ANKHQ9HCJ1 492 aa2.53□□□□□ -2
CD46-210ENST00000462968 ZNHIT6Q9NWK9 470 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 RMND1Q9NWS8 449 aa2.53□□□□□ -2
CD46-210ENST00000462968 UTP6Q9NYH9 597 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 CISD1Q9NZ45 108 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 HACD3Q9P035 362 aa2.53□□□□□ -2
CD46-210ENST00000462968 PDP1Q9P0J1 537 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 MDFICQ9P1T7 246 aa2.53□□□□□ -2
CD46-210ENST00000462968 NKX1-2Q9UD57 310 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 CRLS1Q9UJA2 301 aa2.53□□□□□ -2
CD46-210ENST00000462968 ZNF223Q9UK11 482 aaPredicted RBP2.53□□□□□ -2
CD46-210ENST00000462968 PPIEQ9UNP9 301 aaKnown RBP2.53□□□□□ -2
CD46-210ENST00000462968 CR1P17927 2039 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FREM1Q5H8C1 2179 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 DNAH1Q9P2D7 4330 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IGLV3-16A0A075B6K0 115 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IGKV3D-11A0A0A0MRZ8 115 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 LOC285095A0A1B0GVY8 99 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 LOC390937A0A1W2PQ73 354 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 TCRBV5S1A1TA0A578 114 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 A8MUA0 341 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 H0Y3Z8 333 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 C3orf84H3BNL1 204 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 EIF3FO00303 357 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 WWP2O00308 870 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PSMA7O14818 248 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 P2RX6O15547 441 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 EMC8O43402 210 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PRKNO60260 465 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 RDH16O75452 317 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 GPC4O75487 556 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 STK10O94804 968 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 ACSL3O95573 720 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 BCL10O95999 233 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CGAP01215 116 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 EPOP01588 193 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FTH1P02794 183 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PRB2P02812 416 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 CYP1A2P05177 515 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 HNRNPCP07910 306 aaKnown RBP eCLIP2.52□□□□□ -2.01
CD46-210ENST00000462968 NUDT17P0C025 328 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 RAP2AP10114 183 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PFKFB1P16118 471 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IL1RNP18510 177 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ITGALP20701 1170 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms