RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ZFAND4Q86XD8 727 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 LAS2Q8IYD9 372 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 ADGRF3Q8IZF5 1079 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 NAGSQ8N159 534 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 RNF175Q8N4F7 328 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 OR2A1Q8NGT9 310 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 UBE2E3Q969T4 207 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 KLHL29Q96CT2 875 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CMTM7Q96FZ5 175 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 TMEM41AQ96HV5 264 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 PRAP1Q96NZ9 151 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 MTERF1Q99551 399 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CRB3Q9BUF7 120 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 C1orf50Q9BV19 199 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 WDR12Q9GZL7 423 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 SRMSQ9H3Y6 488 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 LRTM1Q9HBL6 345 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 TRIM36Q9NQ86 728 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 AIG1Q9NVV5 245 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 C1orf109Q9NX04 203 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 SPHK1Q9NYA1 384 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 FBXO4Q9UKT5 387 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 EIF3LQ9Y262 564 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 OR6C74A6NCV1 312 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 MAGEB17A8MXT2 336 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 B4DGG1 531 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 FOXE1O00358 373 aaPredicted RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 BTN3A3O00478 584 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ZSCAN9O15535 394 aaPredicted RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 AQP9O43315 295 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SLC22A3O75751 556 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 RSL1D1O76021 490 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 CCNDBP1O95273 360 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ANXA6P08133 673 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 EZRP15311 586 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 PRPH2P23942 346 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 CXCR2P25025 360 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 CMPK1P30085 196 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 PEBP1P30086 187 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 MRPL19P49406 292 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ACADVLP49748 655 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 RPS13P62277 151 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 RPL38P63173 70 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 CSNK1G2P78368 415 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 PHEXP78562 749 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 GRIK2Q13002 908 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 GPR18Q14330 331 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 KIR2DS3Q14952 304 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 KIAA0040Q15053 153 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 MAPRE2Q15555 327 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 C10orf62Q5T681 223 aaPredicted RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 CYP20A1Q6UW02 462 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 KIRREL2Q6UWL6 708 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 TMIGD1Q6UXZ0 262 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ADCK2Q7Z695 626 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SNX32Q86XE0 403 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ADGRG3Q86Y34 549 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SFTPA2Q8IWL1 248 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ZNF740Q8NDX6 193 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ZNF548Q8NEK5 533 aaPredicted RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 OR4K1Q8NGD4 311 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 HUS1BQ8NHY5 278 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SLC37A2Q8TED4 501 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ABHD5Q8WTS1 349 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 PMM1Q92871 262 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SLC22A18Q96BI1 424 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 AIF1LQ9BQI0 150 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 BTBD10Q9BSF8 475 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 RTKNQ9BST9 563 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 LRMDAQ9H2I8 198 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SPNS1Q9H2V7 528 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 NT5DC2Q9H857 520 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ERVMER34-1Q9H9K5 563 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 BRF2Q9HAW0 419 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 MRPS30Q9NP92 439 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SDR39U1Q9NRG7 319 aaPredicted RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 TMEM184CQ9NVA4 438 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 NMRK1Q9NWW6 199 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 TAS2R1Q9NYW7 299 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 CCDC167Q9P0B6 97 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 MGAT4CQ9UBM8 478 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 VPS29Q9UBQ0 182 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 LRCH1Q9Y2L9 728 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 TMED5Q9Y3A6 229 aa6.93□□□□□ -1.3
UBE4B-204ENST00000462658 RRP15Q9Y3B9 282 aaKnown RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 POLR3HQ9Y535 204 aaPredicted RBP6.93□□□□□ -1.3
UBE4B-204ENST00000462658 ABCA7Q8IZY2 2146 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 SDK1Q7Z5N4 2213 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 PLXND1Q9Y4D7 1925 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 A0A087WV62 115 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 IGKV1-8A0A0C4DH67 115 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 FEZF1A0PJY2 475 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 CFAP73A6NFT4 308 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 ANKDD1BA6NHY2 528 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 AQP12BA6NM10 295 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 LMO7DNF2Z398 122 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 AIM2O14862 343 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 GYG2O15488 501 aa6.92□□□□□ -1.3
UBE4B-204ENST00000462658 OR1F1O43749 312 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms