RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ADAM10O14672 748 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 GNB5O14775 395 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 DLX3O60479 287 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 COQ9O75208 318 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 ERLIN1O75477 346 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 PPM1BO75688 479 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 NADKO95544 446 aaPredicted RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 IL3P08700 152 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 ANXA4P09525 319 aaPredicted RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 PRF1P14222 555 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 GPX3P22352 226 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 NTSP30990 170 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 UQCRC1P31930 480 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 PSMD4P55036 377 aaKnown RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 IFFO1Q0D2I5 559 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 C2orf80Q0P641 193 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 DUSP8Q13202 625 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 SNTA1Q13424 505 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 EFR3AQ14156 821 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 PRICKLE4Q2TBC4 344 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 UNC50Q53HI1 259 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 AAGABQ6PD74 315 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 ANGPTL8Q6UXH0 198 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 TMEM64Q6YI46 380 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 FAM9CQ8IZT9 166 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 TM4SF18Q96CE8 201 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 ERP27Q96DN0 273 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 OMA1Q96E52 524 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 C14orf79Q96F83 325 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 LURAP1Q96LR2 239 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 TMEM237Q96Q45 408 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 OSBPL11Q9BXB4 747 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 STMN4Q9H169 189 aaPredicted RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 SLC6A15Q9H2J7 730 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 C3orf14Q9HBI5 128 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 MCCC2Q9HCC0 563 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 ARGLU1Q9NWB6 273 aaPredicted RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 ZNF446Q9NWS9 450 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 CNOT11Q9UKZ1 510 aaKnown RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 PLLPQ9Y342 182 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 LIPGQ9Y5X9 500 aa8.14□□□□□ -1.11
LDB1-203ENST00000461873 CHCHD2Q9Y6H1 151 aaPredicted RBP8.14□□□□□ -1.11
LDB1-203ENST00000461873 PKDREJQ9NTG1 2253 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 TLDC2A0PJX2 215 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 C19orf84I3L1E1 186 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 PPP6CO00743 305 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 RGS14O43566 566 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 ZNF354AO60765 605 aaPredicted RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 CBR3O75828 277 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 TUBBP07437 444 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 CELA3AP09093 270 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 CT62P0C5K7 136 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 GLI4P10075 376 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 CYP4B1P13584 511 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 DRD5P21918 477 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 TIA1P31483 386 aaKnown RBP eCLIP8.13□□□□□ -1.11
LDB1-203ENST00000461873 GPC1P35052 558 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 CASP3P42574 277 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 KIR3DL1P43629 444 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 PPICP45877 212 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 SLCO1A2P46721 670 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 NCBP2P52298 156 aaKnown RBP eCLIP8.13□□□□□ -1.11
LDB1-203ENST00000461873 HMGCS1Q01581 520 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 ZNF763Q0D2J5 394 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 GALNT1Q10472 559 aaPredicted RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 FOXO1Q12778 655 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 ZNF155Q12901 538 aaPredicted RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 EXOSC7Q15024 291 aaKnown RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 SH2D4BQ5SQS7 431 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 RIPPLY2Q5TAB7 128 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 FAM111BQ6SJ93 734 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 LACC1Q8IV20 430 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 CHERPQ8IWX8 916 aaKnown RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 ZNF615Q8N8J6 731 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 EIF1ADQ8N9N8 165 aaKnown RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 RDH11Q8TC12 318 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.13□□□□□ -1.11
LDB1-203ENST00000461873 UCN3Q969E3 161 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 ABTB1Q969K4 478 aaPredicted RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 ADIPOR1Q96A54 375 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 TMEM41AQ96HV5 264 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 COL21A1Q96P44 957 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 GNRHR2Q96P88 292 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 TRIB1Q96RU8 372 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 EBPLQ9BY08 206 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 ITPAQ9BY32 194 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 ANGPTL4Q9BY76 406 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 NXF5Q9H1B4 397 aaKnown RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 EML4Q9HC35 981 aaKnown RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 SLC35C2Q9NQQ7 365 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 SDHAF3Q9NRP4 125 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 MAT2BQ9NZL9 334 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 STOML1Q9UBI4 398 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 KCNN3Q9UGI6 736 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 DKKL1Q9UK85 242 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 C15orf41Q9Y2V0 281 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 WBP11Q9Y2W2 641 aaKnown RBP8.13□□□□□ -1.11
LDB1-203ENST00000461873 TIMM22Q9Y584 194 aa8.13□□□□□ -1.11
LDB1-203ENST00000461873 CELSR2Q9HCU4 2923 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms