RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 EP400Q96L91 3159 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 UBE4BO95155 1302 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 RTEL1-TNFRSF6BF6WH68 1400 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 DNMT1P26358 1616 aaKnown RBP2.69□□□□□ -1.98
RFC4-211ENST00000460408 RNF103-CHMP3A0A140T963 221 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ARHGAP42A6NI28 874 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ACOD1A6NK06 481 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 RPL37AP8A6NKH3 93 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 RNF212BA8MTL3 300 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 SRRM5B3KS81 715 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 SHISA9B4DS77 424 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 RENP00797 406 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 MELTFP08582 738 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ZCCHC18P0CG32 403 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 KRT5P13647 590 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 GAP43P17677 238 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 SLC6A8P48029 635 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 NPY2RP49146 381 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ZNF131P52739 623 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ATXN3P54252 364 aaPredicted RBP2.69□□□□□ -1.98
RFC4-211ENST00000460408 BPIFB3P59826 476 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 IL1RL1Q01638 556 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 FCHO2Q0JRZ9 810 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 FUT7Q11130 342 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 EMC2Q15006 297 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 C17orf58Q2M2W7 97 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 HKDC1Q2TB90 917 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 RFWD3Q6PCD5 774 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ZNF841Q6ZN19 808 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ASRGL1Q7L266 308 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 TIPARPQ7Z3E1 657 aaKnown RBP2.69□□□□□ -1.98
RFC4-211ENST00000460408 TAF8Q7Z7C8 310 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 GTSCR1Q86UQ5 136 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 AMZ2Q86W34 360 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 SAMD12Q8N8I0 201 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 GPATCH11Q8N954 259 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 LEMD2Q8NC56 503 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 FBXO25Q8TCJ0 367 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 C16orf58Q96GQ5 468 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 NSMCE2Q96MF7 247 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 ANKRD27Q96NW4 1050 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 DEFB118Q96PH6 123 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 SOSTQ9BQB4 213 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 NLNQ9BYT8 704 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 DCTPP1Q9H773 170 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 HOMER3Q9NSC5 361 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 LHX3Q9UBR4 397 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 PIN4Q9Y237 131 aaKnown RBP2.69□□□□□ -1.98
RFC4-211ENST00000460408 GOLGA3Q08378 1498 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 RALGAPBQ86X10 1494 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 UNC13BO14795 1591 aa2.69□□□□□ -1.98
RFC4-211ENST00000460408 UGGT2Q9NYU1 1516 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 DEPDC5O75140 1603 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 TEX48A0A1B0GUV7 120 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 FOXI3A8MTJ6 420 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 E2F3O00716 465 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 OAS1P00973 400 aaKnown RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 TGFAP01135 160 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 ETS1P14921 441 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 GNSP15586 552 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 SHC1P29353 583 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 PRDX6P30041 224 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 SPRP35270 261 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 ZKSCAN8Q15776 578 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 ZNF699Q32M78 642 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 ANKRD55Q3KP44 614 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 AGKQ53H12 422 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 VWA2Q5GFL6 755 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 LINC00242Q5T6M2 205 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 DDI2Q5TDH0 399 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 AGAP7PQ5VUJ5 663 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 LIPKQ5VXJ0 399 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 EMBQ6PCB8 327 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 OLFM4Q6UX06 510 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 MOB2Q70IA6 237 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 KDM8Q8N371 416 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 FGFRL1Q8N441 504 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 LRRC17Q8N6Y2 441 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 POM121L12Q8N7R1 296 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 ZNF397Q8NF99 534 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 OR4Q3Q8NH05 313 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 TMEM37Q8WXS4 190 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 RASL10AQ92737 203 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 CCDC51Q96ER9 411 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 SAMD8Q96LT4 415 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 CPXM1Q96SM3 734 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 C19orf43Q9BQ61 176 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 LRRCC1Q9C099 1032 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 FAM124BQ9H5Z6 455 aaPredicted RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 SP140LQ9H930 580 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 IL1RL2Q9HB29 575 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 CNOT2Q9NZN8 540 aaKnown RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 EIF3KQ9UBQ5 218 aaKnown RBP2.68□□□□□ -1.98
RFC4-211ENST00000460408 IL20RAQ9UHF4 553 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 EMCNQ9ULC0 261 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 MGAT4AQ9UM21 535 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 NUDCQ9Y266 331 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 ZNF175Q9Y473 711 aa2.68□□□□□ -1.98
RFC4-211ENST00000460408 CSAG2Q9Y5P2 127 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms