RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CD93Q9NPY3 652 aa17.08■□□□□ 0.32
HPS3-202ENST00000460120 PAIP2BQ9ULR5 123 aaKnown RBP17.08■□□□□ 0.32
HPS3-202ENST00000460120 KCNK2O95069 426 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ATP5A1P25705 553 aaKnown RBP17.07■□□□□ 0.32
HPS3-202ENST00000460120 PKLRP30613 574 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 SLC15A1P46059 708 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 TMED10P49755 219 aaKnown RBP17.07■□□□□ 0.32
HPS3-202ENST00000460120 ID2Q02363 134 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ZMAT1Q5H9K5 638 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ZNF311Q5JNZ3 666 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 MFSD4BQ5TF39 518 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 DESI1Q6ICB0 168 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ABHD17CQ6PCB6 329 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 USP30Q70CQ3 517 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 TMEFF1Q8IYR6 380 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 FAM46AQ96IP4 442 aaKnown RBP17.07■□□□□ 0.32
HPS3-202ENST00000460120 FGF22Q9HCT0 170 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 PRDM7Q9NQW5 492 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ASB4Q9Y574 426 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ARRDC5A6NEK1 342 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 LOC110117498-PIK3R3F6TDL0 507 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 TPD52L2O43399 206 aaKnown RBP17.07■□□□□ 0.32
HPS3-202ENST00000460120 APODP05090 189 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ASGR2P07307 311 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 IGFALSP35858 605 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ETV5P41161 510 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ETV1P50549 477 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 TJAP1Q5JTD0 557 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 AGAP7PQ5VUJ5 663 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 C12orf73Q69YU5 71 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 OR9Q1Q8NGQ5 310 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 PSD2Q9BQI7 771 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 BTBD1Q9H0C5 482 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 RSPH9Q9H1X1 276 aaPredicted RBP17.07■□□□□ 0.32
HPS3-202ENST00000460120 SLC13A4Q9UKG4 626 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 MKLN1Q9UL63 735 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
HPS3-202ENST00000460120 PCDHGB6Q9Y5F9 930 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 KLK4Q9Y5K2 254 aa17.07■□□□□ 0.32
HPS3-202ENST00000460120 FCMRO60667 390 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 PBX2P40425 430 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 PCYT1AP49585 367 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 SFSWAPQ12872 951 aaKnown RBP17.06■□□□□ 0.32
HPS3-202ENST00000460120 PARM1Q6UWI2 310 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 LINC00299Q6ZSB3 139 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 KIF18BQ86Y91 864 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 NUP43Q8NFH3 380 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 OR8J1Q8NGP2 316 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 GPR151Q8TDV0 419 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 FGF14Q92915 247 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 SLC17A9Q9BYT1 436 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 BARHL1Q9BZE3 327 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 CCDC59Q9P031 241 aaKnown RBP17.06■□□□□ 0.32
HPS3-202ENST00000460120 RPL36Q9Y3U8 105 aaKnown RBP17.06■□□□□ 0.32
HPS3-202ENST00000460120 LINC01565O15544 149 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 OXSR1O95747 527 aaPredicted RBP17.06■□□□□ 0.32
HPS3-202ENST00000460120 CLEC2LP0C7M8 214 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 RPE65Q16518 533 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 PRICKLE2Q7Z3G6 844 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 CELF2-AS1Q8N7Q2 184 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 RASSF5Q8WWW0 418 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 GATAD2BQ8WXI9 593 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 HERVK_113Q902F9 699 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 OR7D2Q96RA2 312 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 MYO10Q9HD67 2058 aa17.06■□□□□ 0.32
HPS3-202ENST00000460120 MUC22E2RYF6 1773 aaPredicted RBP17.06■□□□□ 0.32
HPS3-202ENST00000460120 POM121BA6NF01 834 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 ZNF860A6NHJ4 632 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 PLD2O14939 933 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 RNGTTO60942 597 aaKnown RBP17.05■□□□□ 0.32
HPS3-202ENST00000460120 DNAJB6O75190 326 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 SNRNP200O75643 2136 aaKnown RBP17.05■□□□□ 0.32
HPS3-202ENST00000460120 SCG5P05408 212 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 DRD2P14416 443 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 TRIM23P36406 574 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 SNRPGP62308 76 aaKnown RBP17.05■□□□□ 0.32
HPS3-202ENST00000460120 PPP2CBP62714 309 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 PPP2CAP67775 309 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 SYT14P1Q58G82 188 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 FBXO46Q6PJ61 603 aaPredicted RBP17.05■□□□□ 0.32
HPS3-202ENST00000460120 LAX1Q8IWV1 398 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 OR2L8Q8NGY9 312 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 SFXN1Q9H9B4 322 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 PEX16Q9Y5Y5 336 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 MYO15AQ9UKN7 3530 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 F5P12259 2224 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 FAM170BA6NMN3 283 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 TAF4O00268 1085 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 SNPHO15079 494 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 TBX19O60806 448 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 DDX5P17844 614 aaKnown RBP17.05■□□□□ 0.32
HPS3-202ENST00000460120 CD79BP40259 229 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 GIPRP48546 466 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 TEKQ02763 1124 aa17.05■□□□□ 0.32
HPS3-202ENST00000460120 ZNF181Q2M3W8 571 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms