RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	HEMK1	Q9Y5R4	338 aa	Predicted RBP	9.47	□□□□□ -0.89
MRPL55-223	ENST00000459783	SPEN	Q96T58	3664 aa	Known RBP	9.47	□□□□□ -0.89
MRPL55-223	ENST00000459783	HELZ2	Q9BYK8	2649 aa	Known RBP	9.46	□□□□□ -0.89
MRPL55-223	ENST00000459783	C2orf92	A0A1B0GVN3	265 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	TTLL8	A6PVC2	850 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	TCP11X1	B4DZS4	312 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783		G3V3Y1	287 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	FCHO1	O14526	889 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	DIAPH2	O60879	1101 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	C6orf47	O95873	294 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	SP1	P08047	785 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	FBXO45	P0C2W1	286 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	CCL3	P10147	92 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	MST1	P26927	711 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	MAP3K8	P41279	467 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	PSG6	Q00889	435 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	MAD2L1	Q13257	205 aa	Predicted RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	SPANXN4	Q5MJ08	99 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	EXOSC6	Q5RKV6	272 aa	Known RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	CPTP	Q5TA50	214 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	ZNF324B	Q6AW86	544 aa	Predicted RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	SLC25A25	Q6KCM7	469 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	RPUSD3	Q6P087	351 aa	Known RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	GALNTL5	Q7Z4T8	443 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	SPATA19	Q7Z5L4	167 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	CLECL1	Q8IZS7	167 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	TMEM156	Q8N614	296 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	OR10G3	Q8NGC4	313 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	OR4N2	Q8NGD1	307 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	OR9I1	Q8NGQ6	314 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	CPT1C	Q8TCG5	803 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	GRHL3	Q8TE85	626 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	ASB15	Q8WXK1	588 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	HOXB13	Q92826	284 aa	Predicted RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	TP53INP1	Q96A56	240 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	NTNG2	Q96CW9	530 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	ERP27	Q96DN0	273 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	SPACA9	Q96E40	222 aa	Predicted RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	BTBD9	Q96Q07	612 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	CLMP	Q9H6B4	373 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	CXorf36	Q9H7Y0	433 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	ACSS1	Q9NUB1	689 aa	Predicted RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	NTM	Q9P121	344 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	ABI3	Q9P2A4	366 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	GPR55	Q9Y2T6	319 aa	Predicted RBP	9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783	NAV2	Q8IVL1	2488 aa		9.46	□□□□□ -0.9
MRPL55-223	ENST00000459783		A0A1W2PRB8	838 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	ASPDH	A6ND91	283 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783		A8MVJ9	347 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	ADAM10	O14672	748 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	IFI6	P09912	130 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	DRD5	P21918	477 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	ABCD3	P28288	659 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	RFC3	P40938	356 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	PPIC	P45877	212 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	TDGF1P3	P51864	188 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	DGKQ	P52824	942 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	AQP5	P55064	265 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	FBXW4	P57775	412 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	GPR85	P60893	370 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	HBA1	P69905	142 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	FOXK1	P85037	733 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	MLC1	Q15049	377 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	C6orf163	Q5TEZ5	329 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	BICRAL	Q6AI39	1079 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	NXN	Q6DKJ4	435 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	R3HCC1L	Q7Z5L2	792 aa	Known RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	ZNF605	Q86T29	641 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	SULF2	Q8IWU5	870 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	CLEC4F	Q8N1N0	589 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	CPSF7	Q8N684	471 aa	Known RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	PSD4	Q8NDX1	1056 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	C17orf47	Q8NEP4	570 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	PSMA8	Q8TAA3	256 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	TESC	Q96BS2	214 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	FAM120B	Q96EK7	910 aa	Known RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	ZBED6CL	Q96FA7	236 aa	Predicted RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	OTUB1	Q96FW1	271 aa	Predicted RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	FRMD6	Q96NE9	622 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	DUSP26	Q9BV47	211 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	DPY30	Q9C005	99 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	BHLHE41	Q9C0J9	482 aa	Predicted RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	SDR39U1	Q9NRG7	319 aa	Predicted RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	HPF1	Q9NWY4	346 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	CNOT11	Q9UKZ1	510 aa	Known RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	PCDHGB6	Q9Y5F9	930 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	SHANK1	Q9Y566	2161 aa		9.45	□□□□□ -0.9
MRPL55-223	ENST00000459783	GXYLT2	A0PJZ3	443 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	FRG2C	A6NGY1	282 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783		E9PBE3	544 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	CDK2AP1	O14519	115 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	T	O15178	435 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	ERN1	O75460	977 aa	Known RBP	9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	SLITRK5	O94991	958 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	TGDS	O95455	350 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	ACP2	P11117	423 aa		9.44	□□□□□ -0.9
MRPL55-223	ENST00000459783	CD46	P15529	392 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms