RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LAP3P28838 519 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ADORA2BP29275 332 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SHMT2P34897 504 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DCTP40126 519 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GABRA2P47869 451 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DHPSP49366 369 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 SULT1A2P50226 295 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LUMP51884 338 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 PPP4CP60510 307 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CDK5Q00535 292 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TLE2Q04725 743 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CAMK2DQ13557 499 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HTR4Q13639 388 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LASP1Q14847 261 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 FLYWCH1Q4VC44 716 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ANKRD16Q6P6B7 361 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OPN5Q6U736 354 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LCLAT1Q6UWP7 414 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GDPD4Q6W3E5 623 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TMPRSS11FQ6ZWK6 438 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GTF2H5Q6ZYL4 71 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HIST3H2AQ7L7L0 130 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CMC1Q7Z7K0 106 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SERPINA11Q86U17 422 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZFPM1Q8IX07 1006 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ADGRG2Q8IZP9 1017 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 KDM8Q8N371 416 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 C9orf62Q8N4C0 152 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ZBTB2Q8N680 514 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 B3GALNT2Q8NCR0 500 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TMEM174Q8WUU8 243 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HIST1H2ACQ93077 130 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FATE1Q969F0 183 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PPCDCQ96CD2 204 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OTUB2Q96DC9 234 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GMLQ99445 158 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 BARD1Q99728 777 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 FDXACB1Q9BRP7 624 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 CDCA4Q9BXL8 241 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TM6SF2Q9BZW4 377 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NAA50Q9GZZ1 169 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 ADAM19Q9H013 955 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MFSD1Q9H3U5 465 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TUT1Q9H6E5 874 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 WDCPQ9H6R7 721 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 METTL17Q9H7H0 456 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 IPPKQ9H8X2 491 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 QTRT2Q9H974 415 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 NOX3Q9HBY0 568 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PDE7BQ9NP56 450 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SIRT7Q9NRC8 400 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ACSS1Q9NUB1 689 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 TREM2Q9NZC2 230 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 POLLQ9UGP5 575 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SLC23A1Q9UHI7 598 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PLEKHM1Q9Y4G2 1056 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RBM7Q9Y580 266 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 TRDV1A0A1B0GX56 115 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 A6NL46 340 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 A8MXE2 369 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 B4DEV8 164 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ENPP3O14638 875 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 DPM1O60762 260 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RCBTB2O95199 551 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 KAT7O95251 611 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 OR2C1O95371 312 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TRBC1P01850 177 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FGBP02675 491 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 FGF4P08620 206 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SNRNP70P08621 437 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 IGFBP1P08833 259 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 GIMD1P0DJR0 217 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RPA2P15927 270 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 POU3F3P20264 500 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 PSMB1P20618 241 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 CD247P20963 164 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ALAS2P22557 587 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CCNOP22674 350 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CPT2P23786 658 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NFYBP25208 207 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PCSK1P29120 753 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CCR1P32246 355 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 BMPR1AP36894 532 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 KCNC1P48547 511 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PPT1P50897 306 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CCR9P51686 369 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 SUCLG1P53597 346 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 MTPNP58546 118 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TAS2R39P59534 338 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TAS2R20P59543 309 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 RAB11AP62491 216 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HIST1H3AP68431 136 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HTRA3P83110 453 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 MS4A2Q01362 244 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 TNFRSF17Q02223 184 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CACNB2Q08289 660 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 TNFAIP1Q13829 316 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GNMTQ14749 295 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CTF1Q16619 201 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ATAT1Q5SQI0 421 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms