RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SPPL2AQ8TCT8 520 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 AGR3Q8TD06 166 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 TWIST2Q8WVJ9 160 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 DIO2Q92813 273 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 ERP27Q96DN0 273 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 HSPBAP1Q96EW2 488 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 LCORQ96JN0 433 aaPredicted RBP11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 FCRL1Q96LA6 429 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 ITPAQ9BY32 194 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 SSU72Q9NP77 194 aaKnown RBP11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 MIEF1Q9NQG6 463 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 SUCOQ9UBS9 1254 aaKnown RBP11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 PRODH2Q9UF12 536 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 ZDHHC2Q9UIJ5 367 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 GPR55Q9Y2T6 319 aaPredicted RBP11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 HRH3Q9Y5N1 445 aa11.71□□□□□ -0.53
PRPF40A-203ENST00000448428 NCOA6Q14686 2063 aaPredicted RBP11.71□□□□□ -0.54
PRPF40A-203ENST00000448428 ATP6AP2A0A1C7CYW4 349 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ANKRD33BA6NCL7 494 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 PRRG2O14669 202 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 PIP5K1BO14986 540 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 PLOD3O60568 738 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ATP6AP2O75787 350 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 BCAS2O75934 225 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 JUNP05412 331 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 CELA3AP09093 270 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 RFPL3SP0C7P2 107 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ESRRAP11474 423 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 NEFHP12036 1026 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 NAGAP17050 411 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 SERPINB5P36952 375 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 SERPINB4P48594 390 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ADORA2A-AS1P86434 159 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 BICRALQ6AI39 1079 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 DESI1Q6ICB0 168 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 PAOXQ6QHF9 649 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 C3P1Q6ZMU1 363 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 IKBIPQ70UQ0 350 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 FAM9CQ8IZT9 166 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 OR7G2Q8NG99 324 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 FAM57AQ8TBR7 257 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ITLN2Q8WWU7 325 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 GFM2Q969S9 779 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ANGPTL4Q9BY76 406 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 GLIPR2Q9H4G4 154 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF395Q9H8N7 513 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 ZFP64Q9NPA5 681 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 BAIAP2L1Q9UHR4 511 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 MEMO1Q9Y316 297 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
PRPF40A-203ENST00000448428 LRRC3CA6NJW4 275 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 ADAM10O14672 748 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 TO15178 435 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 ACOX3O15254 700 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 BIRC5O15392 142 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 AKAP10O43572 662 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 ITM2AO43736 263 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 TRIM3O75382 744 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 PPM1BO75688 479 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 IGHG3P01860 377 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 TPOP07202 933 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 DHRS4L1P0CG22 281 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 CT45A8P0DMV1 189 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 CT45A9P0DMV2 189 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 SDC1P18827 310 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 CASP3P42574 277 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 NCBP2P52298 156 aaKnown RBP eCLIP11.69□□□□□ -0.542e-16■□□□□ 8.3
PRPF40A-203ENST00000448428 DCAF7P61962 342 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 RPL38P63173 70 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 CT45A2Q5DJT8 189 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 EMC4Q5J8M3 183 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 TBCELQ5QJ74 424 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 ANKRD26P1Q6NSI1 321 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 LRIG3Q6UXM1 1119 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 NCCRP1Q6ZVX7 275 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 TRILQ7L0X0 811 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 NUP54Q7Z3B4 507 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 MRGPRGQ86SM5 289 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 NTNG2Q96CW9 530 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 OMA1Q96E52 524 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 PGM2Q96G03 612 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 C3orf30Q96M34 536 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 AMDHD1Q96NU7 426 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 SECISBP2Q96T21 854 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 CCT7Q99832 543 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 DOHHQ9BU89 302 aa11.69□□□□□ -0.54
PRPF40A-203ENST00000448428 KCNK9Q9NPC2 374 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms