RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 MAGEB18Q96M61 343 aa12.33□□□□□ -0.44
SNHG4-201ENST00000448190 C7orf26Q96N11 449 aa12.33□□□□□ -0.44
SNHG4-201ENST00000448190 PRPF18Q99633 342 aaKnown RBP12.33□□□□□ -0.44
SNHG4-201ENST00000448190 DPY30Q9C005 99 aa12.33□□□□□ -0.44
SNHG4-201ENST00000448190 FOLH1BQ9HBA9 442 aa12.33□□□□□ -0.44
SNHG4-201ENST00000448190 DDX18Q9NVP1 670 aaKnown RBP12.33□□□□□ -0.44
SNHG4-201ENST00000448190 VPS4AQ9UN37 437 aa12.33□□□□□ -0.44
SNHG4-201ENST00000448190 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
SNHG4-201ENST00000448190 NPFFR2Q9Y5X5 522 aa12.33□□□□□ -0.44
SNHG4-201ENST00000448190 PINLYPA6NC86 204 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 CFLARO15519 480 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 ZNHIT1O43257 154 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 ABCB1P08183 1280 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 PPICP45877 212 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 UQCRFS1P47985 274 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 IDH3AP50213 366 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 MEOX1P50221 254 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 SF3A3Q12874 501 aaKnown RBP eCLIP12.32□□□□□ -0.442e-8■■□□□ 13.7
SNHG4-201ENST00000448190 ZNF155Q12901 538 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 EIF2S3LQ2VIR3 472 aaKnown RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 PRAMEF20Q5VT98 475 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 BICRALQ6AI39 1079 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 OR4F3Q6IEY1 312 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 EPGNQ6UW88 154 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 RTL4Q6ZR62 310 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 SZRD1Q7Z422 152 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 SPATA19Q7Z5L4 167 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 SLC44A2Q8IWA5 706 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 SLC15A4Q8N697 577 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 BCORP1Q8N888 145 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 PSD4Q8NDX1 1056 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 OR4N2Q8NGD1 307 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 TP53INP1Q96A56 240 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 MTERF3Q96E29 417 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 ZBED6CLQ96FA7 236 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 LCORQ96JN0 433 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 YIPF4Q9BSR8 244 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 DUSP26Q9BV47 211 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 EQTNQ9NQ60 294 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 AGPAT4Q9NRZ5 378 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 OLAHQ9NV23 265 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 ASIC5Q9NY37 505 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 TAS2R9Q9NYW1 312 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 PRODH2Q9UF12 536 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 CFL2Q9Y281 166 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 GPR55Q9Y2T6 319 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-201ENST00000448190 SNX8Q9Y5X2 465 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 DOCK10Q96BY6 2186 aa12.32□□□□□ -0.44
SNHG4-201ENST00000448190 CNTRLQ7Z7A1 2325 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 KLRC4-KLRK1H3BQV0 150 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 PLOD2O00469 737 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 ANKRD28O15084 1053 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 ERN1O75460 977 aaKnown RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 BCAS2O75934 225 aaPredicted RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 WISP1O95388 367 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 C6orf47O95873 294 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 P04436 131 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 CNR1P21554 472 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 DRD5P21918 477 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 ABCD3P28288 659 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 DGKQP52824 942 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 AQP5P55064 265 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 NRG3P56975 720 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 RPS6KA2Q15349 733 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 LSM12Q3MHD2 195 aaKnown RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 SLC22A10Q63ZE4 541 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 NPSR1Q6W5P4 371 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 GPALPP1Q8IXQ4 340 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 CLECL1Q8IZS7 167 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 CLEC4FQ8N1N0 589 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 ZFP28Q8NHY6 868 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 FBXO30Q8TB52 745 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 OTUB1Q96FW1 271 aaPredicted RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 C16orf58Q96GQ5 468 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 VSTM2LQ96N03 204 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 BARD1Q99728 777 aaKnown RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 ACSS1Q9NUB1 689 aaPredicted RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 KLF13Q9Y2Y9 288 aaPredicted RBP12.31□□□□□ -0.44
SNHG4-201ENST00000448190 PCDHGB6Q9Y5F9 930 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 GPR45Q9Y5Y3 372 aa12.31□□□□□ -0.44
SNHG4-201ENST00000448190 A0A087WV62 115 aa12.3□□□□□ -0.44
SNHG4-201ENST00000448190 CDK2AP1O14519 115 aa12.3□□□□□ -0.44
SNHG4-201ENST00000448190 REM1O75628 298 aa12.3□□□□□ -0.44
SNHG4-201ENST00000448190 PDE9AO76083 593 aa12.3□□□□□ -0.44
SNHG4-201ENST00000448190 CBX6O95503 412 aa12.3□□□□□ -0.44
SNHG4-201ENST00000448190 CPSF4O95639 269 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms