RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NME6O75414 186 aaPredicted RBP18.18■□□□□ 0.5
SGCE-207ENST00000447873 SORBS2O94875 1100 aaKnown RBP18.18■□□□□ 0.5
SGCE-207ENST00000447873 PSMG1O95456 288 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 HSD17B1P14061 328 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 SPINK2P20155 84 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 MSX2P35548 267 aaPredicted RBP18.18■□□□□ 0.5
SGCE-207ENST00000447873 MAGEA8P43361 318 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 KHKP50053 298 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 SSPNQ14714 243 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 PAPD4Q6PIY7 484 aaKnown RBP18.18■□□□□ 0.5
SGCE-207ENST00000447873 CALHM3Q86XJ0 350 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 HORMAD2Q8N7B1 307 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 SPATA9Q9BWV2 254 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 OR51I1Q9H343 314 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 SERHL2Q9H4I8 314 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 SLC7A8Q9UHI5 535 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 FAM220BPB1ANY3 271 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 NUDT7P0C024 238 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 OTX2P32243 289 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 SOX11P35716 441 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 GZMMP51124 257 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 DSTNP60981 165 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 TXNL4AP83876 142 aaKnown RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 DUSP8Q13202 625 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 TGIF1Q15583 401 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 GCNT6Q5T4J0 391 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 ZCCHC12Q6PEW1 402 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 RNF111Q6ZNA4 994 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 ZNF615Q8N8J6 731 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 CDRT4Q8N9R6 151 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 TNIP2Q8NFZ5 429 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 OR5D16Q8NGK9 328 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 OR1N1Q8NGS0 311 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 FBXO30Q8TB52 745 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 MIPOL1Q8TD10 442 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 ZNF721Q8TF20 911 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 REXO5Q96IC2 774 aaKnown RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 GPN2Q9H9Y4 310 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 WDR70Q9NW82 654 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 PRODH2Q9UF12 536 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 USP22Q9UPT9 525 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 PCDHGA6Q9Y5G7 932 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 HEMK1Q9Y5R4 338 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 HS3ST3B1Q9Y662 390 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 TNFRSF21O75509 655 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 CIB2O75838 187 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 SEC24DO94855 1032 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 CLPSP04118 112 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 IGKV3-11P04433 115 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 ID4P47928 161 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 EMDP50402 254 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 ZNF155Q12901 538 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 CDC73Q6P1J9 531 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 WDR53Q7Z5U6 358 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 ZNF321PQ8N8H1 164 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 B3GNT7Q8NFL0 401 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 C16orf52Q8NHV5 167 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 ADAMTS15Q8TE58 950 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 SLC9A6Q92581 669 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 RAB8BQ92930 207 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 OTUB1Q96FW1 271 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 OR7D2Q96RA2 312 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 WDR77Q9BQA1 342 aaPredicted RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 THUMPD1Q9NXG2 353 aaKnown RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 SUCOQ9UBS9 1254 aaKnown RBP18.17■□□□□ 0.5
SGCE-207ENST00000447873 CFL2Q9Y281 166 aa18.17■□□□□ 0.5
SGCE-207ENST00000447873 AKAP13Q12802 2813 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 ELOVL7A1L3X0 281 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 DUXAA6NLW8 204 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 HMGN4O00479 90 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 OR12D1P0DN82 309 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 BMP2P12643 396 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 HTR1EP28566 365 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 SLC37A1P57057 533 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 TRIM25Q14258 630 aaKnown RBP18.16■□□□□ 0.5
SGCE-207ENST00000447873 ADRM1Q16186 407 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 TBC1D25Q3MII6 688 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 ERICH5Q6P6B1 374 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 KIRREL2Q6UWL6 708 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 NET1Q7Z628 596 aaPredicted RBP18.16■□□□□ 0.5
SGCE-207ENST00000447873 MICU2Q8IYU8 434 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 LGI4Q8N135 537 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 SLC16A11Q8NCK7 471 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 XAGE5Q8WWM1 108 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 NCLNQ969V3 563 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 NACC2Q96BF6 587 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 NUDT9Q9BW91 350 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 PCDHAC1Q9H158 963 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 FOLH1BQ9HBA9 442 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 WASF3Q9UPY6 502 aa18.16■□□□□ 0.5
SGCE-207ENST00000447873 MRPS18BQ9Y676 258 aaKnown RBP18.16■□□□□ 0.5
SGCE-207ENST00000447873 IGHV1-45A0A0A0MS14 117 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 SOCS6O14544 535 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 ASNA1O43681 348 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 ALOX5P09917 674 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 MAN2A2P49641 1150 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 BNIP2Q12982 314 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 PCOLCEQ15113 449 aa18.15■□□□□ 0.5
SGCE-207ENST00000447873 ZNHIT3Q15649 155 aaPredicted RBP18.15■□□□□ 0.5
SGCE-207ENST00000447873 VMACQ2NL98 169 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms