RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 METTL6Q8TCB7 284 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 MARVELD3Q96A59 401 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ANKRD9Q96BM1 317 aaPredicted RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ART5Q96L15 291 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 CCT7Q99832 543 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 RSRP1Q9BUV0 290 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ELOVL6Q9H5J4 265 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 LYARQ9NX58 379 aaKnown RBP8.11□□□□□ -1.11
USP6NL-203ENST00000443016 ENTPD4Q9Y227 616 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 FIS1Q9Y3D6 152 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 TSC22D4Q9Y3Q8 395 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 TRAF6Q9Y4K3 522 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 GTF3C1Q12789 2109 aa8.11□□□□□ -1.11
USP6NL-203ENST00000443016 G3V3Y1 287 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ACOT7O00154 380 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 FOXE1O00358 373 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 HDAC3O15379 428 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 EEDO75530 441 aaKnown RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 FAM107AO95990 144 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 TPOP07202 933 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 FGF4P08620 206 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 FAM58BPP0C7Q3 252 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 NR2F6P10588 404 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 KITP10721 976 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ALOX15P16050 662 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 PTGER1P34995 402 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SEC24CP53992 1094 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 HNRNPH2P55795 449 aaKnown RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF750Q32MQ0 723 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SGO1Q5FBB7 561 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 CES4AQ5XG92 561 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 FRG2Q64ET8 278 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 BLOC1S3Q6QNY0 202 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ST13P4Q8IZP2 240 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 CDYL2Q8N8U2 506 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZFP62Q8NB50 900 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 OR8K3Q8NH51 312 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 FRG2BQ96QU4 278 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 GAL3ST4Q96RP7 486 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SERPINI1Q99574 410 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 CHST11Q9NPF2 352 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 AHSPQ9NZD4 102 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 CSMD2Q7Z408 3487 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 A0A1B0GTH9 108 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 TMEM200CA6NKL6 621 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 B9A039 149 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 NDUFAB1O14561 156 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 UBFD1O14562 309 aaKnown RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 PROM1O43490 865 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 P04436 131 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 HTR1EP28566 365 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF267Q14586 743 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 GKAP1Q5VSY0 366 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 KANK2Q63ZY3 851 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 LETMD1Q6P1Q0 360 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ARHGAP11AQ6P4F7 1023 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 PAOXQ6QHF9 649 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 BNC2Q6ZN30 1099 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 RTL4Q6ZR62 310 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 GK5Q6ZS86 529 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SLC29A4Q7RTT9 530 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SPATA21Q7Z572 469 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 C16orf52Q8NHV5 167 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 WDR20Q8TBZ3 569 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SLC22A8Q8TCC7 542 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 DOK4Q8TEW6 326 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF721Q8TF20 911 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 RIT1Q92963 219 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 SGCZQ96LD1 299 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 PELOQ9BRX2 385 aaKnown RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 C20orf27Q9GZN8 174 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 DEFB127Q9H1M4 99 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 DDX31Q9H8H2 851 aaKnown RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 KLHL14Q9P2G3 628 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZDHHC2Q9UIJ5 367 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF835Q9Y2P0 537 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 MEMO1Q9Y316 297 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 KLF2Q9Y5W3 355 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-203ENST00000443016 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 DNAJC13O75165 2243 aa8.1□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF407Q9C0G0 2248 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 POLQO75417 2590 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 WASHC1A8K0Z3 465 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 FAM166BA8MTA8 275 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 TMPRSS11DO60235 418 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 SKAP2O75563 359 aaPredicted RBP8.09□□□□□ -1.11
USP6NL-203ENST00000443016 GPR75O95800 540 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 PF4P02776 101 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 RAC2P15153 192 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 DRD4P21917 467 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 ARRB2P32121 409 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 BSGP35613 385 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 PPIAP62937 165 aaKnown RBP8.09□□□□□ -1.11
USP6NL-203ENST00000443016 ERVK-8P63133 956 aa8.09□□□□□ -1.11
USP6NL-203ENST00000443016 PDCD2Q16342 344 aaPredicted RBP8.09□□□□□ -1.11
USP6NL-203ENST00000443016 SWT1Q5T5J6 900 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms