RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 AICDAQ9GZX7 198 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SPRTNQ9H040 489 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-206ENST00000441089 MYLK2Q9H1R3 596 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SRMSQ9H3Y6 488 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF385DQ9H6B1 395 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ACTR8Q9H981 624 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PELI2Q9HAT8 420 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 OR6C2Q9NZP2 312 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 PPP4R1LQ9P1A2 415 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 FBXL7Q9UJT9 491 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 TINAGQ9UJW2 476 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 STK38LQ9Y2H1 464 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 ARL2BPQ9Y2Y0 163 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 KCNE2Q9Y6J6 123 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 SVEP1Q4LDE5 3571 aa4.47□□□□□ -1.69
PTPN4-206ENST00000441089 CPAMD8Q8IZJ3 1885 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 TRAV17A0A0B4J275 112 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 A0A0G2JK05 382 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FEZF1A0PJY2 475 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 GSAPA4D1B5 854 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 OR5K3A6NET4 321 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ZNF839A8K0R7 811 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 MAGEB17A8MXT2 336 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ISM1B1AKI9 464 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 E9PBE3 544 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 E9PLN8 166 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 H0YIV9 168 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FCHO1O14526 889 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 CLGNO14967 610 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 LSM1O15116 133 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 HCRTR1O43613 425 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 LCMT2O60294 686 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 UGDHO60701 494 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 PRAMEF2O60811 474 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 CRCPO75575 148 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 KLHL18O94889 574 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ALDOCP09972 364 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 PVRP15151 417 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 GNAZP19086 355 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 HMOX2P30519 316 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ARL1P40616 181 aaPredicted RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 HNF4AP41235 474 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 GRIA3P42263 894 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 PRDX1Q06830 199 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 MAP4K2Q12851 820 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 LSAMPQ13449 338 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 KEAP1Q14145 624 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 KIR2DS3Q14952 304 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 KIAA0040Q15053 153 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SF1Q15637 639 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SLC5A12Q1EHB4 618 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 PRSS53Q2L4Q9 553 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SGO1Q5FBB7 561 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 EMC4Q5J8M3 183 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SLC35F1Q5T1Q4 408 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 THEMIS2Q5TEJ8 643 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FRG2Q64ET8 278 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ATG9BQ674R7 924 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 MED27Q6P2C8 311 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SPESP1Q6UW49 350 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FAM198BQ6UWH4 519 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 PAMR1Q6UXH9 720 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ISLR2Q6UXK2 745 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 Q6ZPB1 254 aaPredicted RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 STK32CQ86UX6 486 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 C17orf64Q86WR6 236 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 MYLK4Q86YV6 388 aaPredicted RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 DDIASQ8IXT1 998 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 RBM12BQ8IXT5 1001 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 LAS2Q8IYD9 372 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 DSELQ8IZU8 1212 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 RAB42Q8N4Z0 105 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FITM2Q8N6M3 262 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ANKRD53Q8N9V6 530 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 OR7G3Q8NG95 312 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 HUS1BQ8NHY5 278 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ACTRT2Q8TDY3 377 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 ASB5Q8WWX0 329 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SELENOMQ8WWX9 145 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 NACC2Q96BF6 587 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 CLIP3Q96DZ5 547 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 APIPQ96GX9 242 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SLC41A2Q96JW4 573 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FAR2Q96K12 515 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 WWC2-AS2Q96NR7 200 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 FRG2BQ96QU4 278 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 TAAR6Q96RI8 345 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 VKORC1Q9BQB6 163 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SIKE1Q9BRV8 207 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 CCDC28BQ9BUN5 200 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 EFCAB11Q9BUY7 163 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 RAB33BQ9H082 229 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 LIME1Q9H400 295 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 EHD1Q9H4M9 534 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 MRPS30Q9NP92 439 aaKnown RBP4.46□□□□□ -1.7
PTPN4-206ENST00000441089 KCNJ16Q9NPI9 418 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 TCF7L2Q9NQB0 619 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 SAR1AQ9NR31 198 aa4.46□□□□□ -1.7
PTPN4-206ENST00000441089 P4HTMQ9NXG6 502 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms