RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PACSIN3Q9UKS6 424 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 PRPF19Q9UMS4 504 aaKnown RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 VPS4AQ9UN37 437 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 PCDHGB4Q9UN71 923 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 SATB2Q9UPW6 733 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 ENTPD4Q9Y227 616 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 PCDHGA3Q9Y5H0 932 aa6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 COL27A1Q8IZC6 1860 aaPredicted RBP6.58□□□□□ -1.36
LSM3P3-201ENST00000436601 WDFY4Q6ZS81 3184 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PRORSD1PA6NEY8 169 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 CLIC1O00299 241 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PDE5AO76074 875 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 STK17BO94768 372 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ANP32DO95626 131 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ATP1B1P05026 303 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ZGLP1P0C6A0 271 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 JMJD7P0C870 316 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 NQO1P15559 274 aaKnown RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PORP16435 677 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 GPX2P18283 190 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 NAT1P18440 290 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 AGXTP21549 392 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 UQCRC2P22695 453 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PPP2R1BP30154 601 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 GZMMP51124 257 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 MVDP53602 400 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 MTPNP58546 118 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 RSPO4Q2I0M5 234 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF628Q5EBL2 1059 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PIGGQ5H8A4 983 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 C3orf38Q5JPI3 329 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FHL5Q5TD97 284 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 CDPF1Q6NVV7 123 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FAM199XQ6PEV8 388 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 SHISA6Q6ZSJ9 500 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 TMPRSS7Q7RTY8 843 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 TIPARPQ7Z3E1 657 aaKnown RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 GPR155Q7Z3F1 870 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 HPS6Q86YV9 775 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PRSS58Q8IYP2 241 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ULK2Q8IYT8 1036 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FBXW8Q8N3Y1 598 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 RNF148Q8N7C7 305 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 SIMC1Q8NDZ2 872 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 OR7G2Q8NG99 324 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 OR5AK3PQ8NH89 298 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ZFP28Q8NHY6 868 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 STT3BQ8TCJ2 826 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 DOK4Q8TEW6 326 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ZFP90Q8TF47 636 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FKBP10Q96AY3 582 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ELP4Q96EB1 424 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FAM46AQ96IP4 442 aaKnown RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ZNF583Q96ND8 569 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PTCHD1Q96NR3 888 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC35A5Q9BS91 424 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 THUMPD3Q9BV44 507 aaKnown RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ALOXE3Q9BYJ1 711 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 VN1R1Q9GZP7 353 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 PRDM14Q9GZV8 571 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 CHST8Q9H2A9 424 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 SLC26A1Q9H2B4 701 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 MMADHCQ9H3L0 296 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 KAT8Q9H7Z6 458 aaKnown RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ANKRA2Q9H9E1 313 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 TPT1P8Q9HAU6 139 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 GIMAP4Q9NUV9 329 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 FOXJ2Q9P0K8 574 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 IFT80Q9P2H3 777 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 CD300AQ9UGN4 299 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ACSL6Q9UKU0 697 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 USP22Q9UPT9 525 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 MRPS33Q9Y291 106 aaKnown RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 MMACHCQ9Y4U1 282 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 SNX8Q9Y5X2 465 aa6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 ARID1BQ8NFD5 2236 aaPredicted RBP6.57□□□□□ -1.36
LSM3P3-201ENST00000436601 KNL1Q8NG31 2342 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 ANKRD12Q6UB98 2062 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 C15orf38-AP3S2A0A0A6YYH1 394 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 TCRBV16S1A1N1A0A5B0 115 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 CFAP73A6NFT4 308 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 UPK1AO00322 258 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 PLOD2O00469 737 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 AQP7O14520 342 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 NVLO15381 856 aaKnown RBP6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 TNFSF15O95150 251 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 KLK3P07288 261 aaPredicted RBP6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 CT62P0C5K7 136 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 S1PR1P21453 382 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 NT5EP21589 574 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 MSX2P35548 267 aaPredicted RBP6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 MC3RP41968 323 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 STT3AP46977 705 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 CCT3P49368 545 aaKnown RBP6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 GSK3BP49841 420 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 CASP9P55211 416 aa6.56□□□□□ -1.36
LSM3P3-201ENST00000436601 EEFSECP57772 596 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms