RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 ACP1P24666 158 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 RPA1P27694 616 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 PRELPP51888 382 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ZNF131P52739 623 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 BTG3Q14201 252 aaPredicted RBP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 KARSQ15046 597 aaKnown RBP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ZNF528Q3MIS6 628 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 PARP10Q53GL7 1025 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 HERC4Q5GLZ8 1057 aaPredicted RBP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 MUC21Q5SSG8 566 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 CNSTQ6PJW8 725 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 CDHR3Q6ZTQ4 885 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 NUFIP2Q7Z417 695 aaKnown RBP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 SLC22A16Q86VW1 577 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ZNF781Q8N8C0 355 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 NPRL2Q8WTW4 380 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 TMEM186Q96B77 213 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 CAPNS2Q96L46 248 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ANKRD27Q96NW4 1050 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ACCSQ96QU6 501 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 SPAG8Q99932 426 aaPredicted RBP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 NLNQ9BYT8 704 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 HEXA-AS1Q9H8Q6 139 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 HPS4Q9NQG7 708 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 VPS54Q9P1Q0 977 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ERVK-18Q9QC07 812 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 EIF3KQ9UBQ5 218 aaKnown RBP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 MOB4Q9Y3A3 225 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 DEPDC5O75140 1603 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 TNRQ92752 1358 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC00353-201ENST00000435401 NPATQ14207 1427 aa3.1□□□□□ -1.91
LINC00353-201ENST00000435401 ERVK-7P63135 1459 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 PRDM15P57071 1507 aaPredicted RBP3.09□□□□□ -1.91
LINC00353-201ENST00000435401 DUOX2Q9NRD8 1548 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 SYNMO15061 1565 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 VWDEQ8N2E2 1590 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 E9PCH4 1651 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 CHEK1O14757 476 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 MT-ATP6P00846 226 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 TGFAP01135 160 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 IGHG1P01857 330 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 CXCL10P02778 98 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 FCER2P06734 321 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 HCKP08631 526 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 SERPINF2P08697 491 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 MBL2P11226 248 aaPredicted RBP3.09□□□□□ -1.91
LINC00353-201ENST00000435401 PPP2R1AP30153 589 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 SLC1A4P43007 532 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ALDH3B1P43353 468 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 SLC1A6P48664 564 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 NPY2RP49146 381 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ATXN3P54252 364 aaPredicted RBP3.09□□□□□ -1.91
LINC00353-201ENST00000435401 RAG2P55895 527 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 MS4A2Q01362 244 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 COX10Q12887 443 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 FASTKQ14296 549 aaKnown RBP3.09□□□□□ -1.91
LINC00353-201ENST00000435401 CCL14Q16627 93 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 CCDC40Q4G0X9 1142 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 HIST2H2AA3Q6FI13 130 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 TMEM26Q6ZUK4 368 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 MIER3Q7Z3K6 550 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 TAF8Q7Z7C8 310 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 YRDCQ86U90 279 aaKnown RBP3.09□□□□□ -1.91
LINC00353-201ENST00000435401 RNF130Q86XS8 419 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 LMNTD2Q8IXW0 634 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 LRRC17Q8N6Y2 441 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ICA1LQ8NDH6 482 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 OR4Q3Q8NH05 313 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 TMEM45BQ96B21 275 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 LRRCC1Q9C099 1032 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ADNPQ9H2P0 1102 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 DCTPP1Q9H773 170 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 JPT2Q9H910 190 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 IL1RL2Q9HB29 575 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ADGRL4Q9HBW9 690 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 CLIP2Q9UDT6 1046 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 KLK13Q9UKR3 277 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 CCPG1Q9ULG6 757 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ODF2LQ9ULJ1 636 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ENTPD4Q9Y227 616 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 AUP1Q9Y679 476 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 SETD1AO15047 1707 aaKnown RBP3.09□□□□□ -1.91
LINC00353-201ENST00000435401 ZMYM6O95789 1325 aa3.09□□□□□ -1.91
LINC00353-201ENST00000435401 KIF15Q9NS87 1388 aa3.09□□□□□ -1.92
LINC00353-201ENST00000435401 RTEL1-TNFRSF6BF6WH68 1400 aa3.09□□□□□ -1.92
LINC00353-201ENST00000435401 PTPRTO14522 1441 aa3.09□□□□□ -1.92
LINC00353-201ENST00000435401 ABCC5O15440 1437 aa3.09□□□□□ -1.92
LINC00353-201ENST00000435401 FGD6Q6ZV73 1430 aa3.09□□□□□ -1.92
LINC00353-201ENST00000435401 ADAMTS9Q9P2N4 1935 aa3.09□□□□□ -1.92
LINC00353-201ENST00000435401 TCOF1Q13428 1488 aaKnown RBP3.09□□□□□ -1.92
LINC00353-201ENST00000435401 MED1Q15648 1581 aaPredicted RBP3.08□□□□□ -1.92
LINC00353-201ENST00000435401 IGHV3-16A0A0C4DH30 117 aa3.08□□□□□ -1.92
LINC00353-201ENST00000435401 ARHGAP42A6NI28 874 aa3.08□□□□□ -1.92
LINC00353-201ENST00000435401 SRRM5B3KS81 715 aa3.08□□□□□ -1.92
LINC00353-201ENST00000435401 TSPAN2O60636 221 aa3.08□□□□□ -1.92
LINC00353-201ENST00000435401 HIST1H2AGP0C0S8 130 aaPredicted RBP3.08□□□□□ -1.92
LINC00353-201ENST00000435401 CCDC192P0DO97 292 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms