RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TLX2O43763 284 aaPredicted RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 GPX5O75715 221 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 IGFBP1P08833 259 aaPredicted RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 ALOX12P18054 663 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 FEN1P39748 380 aaKnown RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 RORCP51449 518 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 TAS2R41P59536 307 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 KIAA1024LP59773 190 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 RUNX1T1Q06455 604 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 RGS1Q08116 209 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 ST3GAL3Q11203 375 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 TSPAN31Q12999 210 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 GPR19Q15760 415 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 C2orf27AQ580R0 203 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 ZNF311Q5JNZ3 666 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 C3orf38Q5JPI3 329 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 STEAP3Q658P3 488 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 SDE2Q6IQ49 451 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 ZNF425Q6IV72 752 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 ZER1Q7Z7L7 766 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 MRGPREQ86SM8 312 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 CCDC116Q8IYX3 515 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 TMEM145Q8NBT3 493 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 TOR1AIP2Q8NFQ8 470 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 OR6T1Q8NGN1 323 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 TMEM163Q8TC26 289 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 NT5CQ8TCD5 201 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 KLK6Q92876 244 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 ELSPBP1Q96BH3 223 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 SLC22A18Q96BI1 424 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 CHFRQ96EP1 664 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 CNRIP1Q96F85 164 aaPredicted RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 OR2M4Q96R27 311 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 SLC30A2Q9BRI3 323 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 CNPPD1Q9BV87 410 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 ACTRT3Q9BYD9 372 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 POLR2J2Q9GZM3 115 aaKnown RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 SMURF1Q9HCE7 757 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 PRDM9Q9NQV7 894 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 MAN2C1Q9NTJ4 1040 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 NDUFB11Q9NX14 153 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 FBXL12Q9NXK8 326 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 OR6C2Q9NZP2 312 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 SERGEFQ9UGK8 458 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 SCML1Q9UN30 329 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
CD44-210ENST00000434472 ISM1B1AKI9 464 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 ZNF670-ZNF695F2Z2N8 137 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PPM1DO15297 605 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PRKYO43930 277 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 ADAM23O75077 832 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 CYP7B1O75881 506 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 DLGAP3O95886 979 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 CA3P07451 260 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 ADRA2AP08913 450 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 NR2F6P10588 404 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 CKMT1AP12532 417 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 MYL12AP19105 171 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PRKAR1BP31321 381 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 STAT5AP42229 794 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 EIF2B2P49770 351 aaKnown RBP9.8□□□□□ -0.84
CD44-210ENST00000434472 DGKEP52429 567 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 EFNB1P98172 346 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 FUT5Q11128 374 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 RAB40BQ12829 278 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 SNAPC1Q16533 368 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 TMEM107Q6UX40 140 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 WASH2PQ6VEQ5 465 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 RASSF6Q6ZTQ3 369 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 RRM2BQ7LG56 351 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 C16orf62Q7Z3J2 963 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 AMIGO1Q86WK6 493 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PAQR7Q86WK9 346 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 CACUL1Q86Y37 369 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 OR52I1Q8NGK6 324 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 OR14C36Q8NHC7 312 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PIGXQ8TBF5 258 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 ELP4Q96EB1 424 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 OTUB1Q96FW1 271 aaPredicted RBP9.8□□□□□ -0.84
CD44-210ENST00000434472 ZNF582Q96NG8 517 aaPredicted RBP9.8□□□□□ -0.84
CD44-210ENST00000434472 WFDC6Q9BQY6 131 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 YIPF4Q9BSR8 244 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PLA2G2FQ9BZM2 168 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 RNF167Q9H6Y7 350 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 KRCC1Q9NPI7 259 aaPredicted RBP9.8□□□□□ -0.84
CD44-210ENST00000434472 APOBEC3BQ9UH17 382 aaKnown RBP9.8□□□□□ -0.84
CD44-210ENST00000434472 PHF11Q9UIL8 331 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 ITGB1BP2Q9UKP3 347 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 PLEKHM1Q9Y4G2 1056 aa9.8□□□□□ -0.84
CD44-210ENST00000434472 TMEM129A0AVI4 362 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 URADA6NGE7 173 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 GLOD5A6NK44 160 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 FAM170BA6NMN3 283 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 OR52A4PA6NMU1 304 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 STK25O00506 426 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 AP3D1O14617 1153 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 PRODHO43272 600 aa9.79□□□□□ -0.84
CD44-210ENST00000434472 LATO43561 262 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms