RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 EML4Q9HC35 981 aaKnown RBP12.54□□□□□ -0.4
SNX3-204ENST00000426155 SSU72Q9NP77 194 aaKnown RBP12.54□□□□□ -0.4
SNX3-204ENST00000426155 BAIAP2L1Q9UHR4 511 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 NPFFR2Q9Y5X5 522 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 LIPGQ9Y5X9 500 aa12.54□□□□□ -0.4
SNX3-204ENST00000426155 A0A1B0GTH9 108 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 WIPF3A6NGB9 483 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 MYO1GB0I1T2 1018 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 AKAP10O43572 662 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 GLSO94925 669 aaPredicted RBP12.53□□□□□ -0.4
SNX3-204ENST00000426155 CLDN1O95832 211 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 CNR1P21554 472 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 BGNP21810 368 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 SERPINB5P36952 375 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 MC3RP41968 323 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 CA7P43166 264 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 MAGEA5P43359 124 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 GSTM5P46439 218 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 NCBP2P52298 156 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNX3-204ENST00000426155 PPIAP62937 165 aaKnown RBP12.53□□□□□ -0.4
SNX3-204ENST00000426155 RBPJQ06330 500 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 FOXO1Q12778 655 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 RPS6KA2Q15349 733 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 NTRK2Q16620 822 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 TMEM107Q6UX40 140 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 C3P1Q6ZMU1 363 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 FAM9CQ8IZT9 166 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 TAGAPQ8N103 731 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 GHDCQ8N2G8 530 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 FBXW8Q8N3Y1 598 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 SLC15A4Q8N697 577 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 TMEM251Q8N6I4 163 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 ZNF781Q8N8C0 355 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 FAM76AQ8TAV0 307 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 ZNF675Q8TD23 568 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 NUDT8Q8WV74 236 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 CIDECQ96AQ7 238 aaPredicted RBP12.53□□□□□ -0.4
SNX3-204ENST00000426155 PPP1R36Q96LQ0 422 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 CCT7Q99832 543 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 C1orf50Q9BV19 199 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 GLIPR2Q9H4G4 154 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 GIMAP4Q9NUV9 329 aa12.53□□□□□ -0.4
SNX3-204ENST00000426155 CNOT11Q9UKZ1 510 aaKnown RBP12.53□□□□□ -0.4
SNX3-204ENST00000426155 NCOA6Q14686 2063 aaPredicted RBP12.53□□□□□ -0.4
SNX3-204ENST00000426155 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 CCL21O00585 134 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 TM9SF1O15321 606 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 PEX11AO75192 247 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 ERLIN1O75477 346 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 HSPA4LO95757 839 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 SERPINE1P05121 402 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 RFPL3SP0C7P2 107 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 ABOP16442 354 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 EFNA1P20827 205 aaPredicted RBP12.52□□□□□ -0.41
SNX3-204ENST00000426155 ABCD3P28288 659 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 CORO7P57737 925 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 KCNJ2P63252 427 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNX3-204ENST00000426155 KRTCAP3Q53RY4 240 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 NPSR1Q6W5P4 371 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 GK5Q6ZS86 529 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 IKBIPQ70UQ0 350 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 ZNF771Q7L3S4 317 aaPredicted RBP12.52□□□□□ -0.41
SNX3-204ENST00000426155 SPPL2CQ8IUH8 684 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 MGARPQ8TDB4 240 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 DIO2Q92813 273 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 OMA1Q96E52 524 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 CCDC120Q96HB5 630 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 PAIP2Q9BPZ3 127 aaKnown RBP12.52□□□□□ -0.41
SNX3-204ENST00000426155 TNFRSF10DQ9UBN6 386 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
SNX3-204ENST00000426155 ZNF835Q9Y2P0 537 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 ACTL7BQ9Y614 415 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.52□□□□□ -0.41
SNX3-204ENST00000426155 PCNX1Q96RV3 2341 aa12.52□□□□□ -0.41
SNX3-204ENST00000426155 A0A1B0GUH1 482 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 ACOT7O00154 380 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 ZWINTO95229 277 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 BCKDHAP12694 445 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 COL8A1P27658 744 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 NTSP30990 170 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 MPIP34949 423 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 NRG3P56975 720 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
SNX3-204ENST00000426155 ABCE1P61221 599 aaKnown RBP12.51□□□□□ -0.41
SNX3-204ENST00000426155 PLCXD2Q0VAA5 305 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 HSPB3Q12988 150 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 PDCD2Q16342 344 aaPredicted RBP12.51□□□□□ -0.41
SNX3-204ENST00000426155 ZNF551Q7Z340 670 aaPredicted RBP12.51□□□□□ -0.41
SNX3-204ENST00000426155 WDR53Q7Z5U6 358 aaPredicted RBP12.51□□□□□ -0.41
SNX3-204ENST00000426155 SAMD14Q8IZD0 417 aaPredicted RBP12.51□□□□□ -0.41
SNX3-204ENST00000426155 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 SPPL2AQ8TCT8 520 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 RELTQ969Z4 430 aa12.51□□□□□ -0.41
SNX3-204ENST00000426155 METTL2AQ96IZ6 378 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms