RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MRPL14Q6P1L8 145 aaKnown RBP14.64□□□□□ -0.07
SHOX2-202ENST00000425436 UGT2A3Q6UWM9 527 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 LRRC69Q6ZNQ3 347 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 EIF3MQ7L2H7 374 aaKnown RBP14.64□□□□□ -0.07
SHOX2-202ENST00000425436 LAPTM4BQ86VI4 370 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 ZDHHC13Q8IUH4 622 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 ZCCHC7Q8N3Z6 543 aaKnown RBP14.64□□□□□ -0.07
SHOX2-202ENST00000425436 ZBED6CLQ96FA7 236 aaPredicted RBP14.64□□□□□ -0.07
SHOX2-202ENST00000425436 PEX11GQ96HA9 241 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 VPS50Q96JG6 964 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 CCNL2Q96S94 520 aaPredicted RBP14.64□□□□□ -0.07
SHOX2-202ENST00000425436 SLC35A5Q9BS91 424 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 TMEM38AQ9H6F2 299 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 SOX17Q9H6I2 414 aaPredicted RBP14.64□□□□□ -0.07
SHOX2-202ENST00000425436 BAG5Q9UL15 447 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 ERVK-11Q9UQG0 969 aa14.64□□□□□ -0.07
SHOX2-202ENST00000425436 A0A0A6YYD5 115 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 OR2W5A6NFC9 320 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 C21orf140B9A014 251 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 PDPK1O15530 556 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 KLF7O75840 302 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 TNFAIP8O95379 198 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 HPRP00739 348 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 UBTFL6P0CB48 400 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF23P17027 643 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ATP5A1P25705 553 aaKnown RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 CHI3L1P36222 383 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 OCA2Q04671 838 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ADRM1Q16186 407 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 NKG7Q16617 165 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF630Q2M218 657 aaPredicted RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 C6orf52Q5T4I8 152 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ENPP6Q6UWR7 440 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 CBLL1Q75N03 491 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 PTOV1Q86YD1 416 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ACOT4Q8N9L9 421 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 STT3BQ8TCJ2 826 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 TFAP2CQ92754 450 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 GPR87Q9BY21 358 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 RBCK1Q9BYM8 510 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ANKRD60Q9BZ19 345 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 ADPRHL2Q9NX46 363 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 THUMPD1Q9NXG2 353 aaKnown RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 KCND3Q9UK17 655 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 PTRH2Q9Y3E5 179 aaKnown RBP14.63□□□□□ -0.07
SHOX2-202ENST00000425436 MAP4K5Q9Y4K4 846 aa14.63□□□□□ -0.07
SHOX2-202ENST00000425436 FAM227AF5H4B4 570 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 B3GALT2O43825 422 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 DPM1O60762 260 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 SMNDC1O75940 238 aaKnown RBP eCLIP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 ALBP02768 609 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 RAB40ALP0C0E4 278 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 ZGLP1P0C6A0 271 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 HIST1H1TP22492 207 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 FRKP42685 505 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 CRATP43155 626 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 MAGEA2P43356 314 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 XCR1P46094 333 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 PRIM2P49643 509 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 ARHGDIAP52565 204 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 MANFP55145 182 aaKnown RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 TLE3Q04726 772 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 MERTKQ12866 999 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 SLAMF1Q13291 335 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 GCNT6Q5T4J0 391 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF551Q7Z340 670 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 EPHX4Q8IUS5 362 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 CA13Q8N1Q1 262 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 ZFP28Q8NHY6 868 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 FAM110BQ8TC76 370 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 FKBP10Q96AY3 582 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 CNBD2Q96M20 576 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 SERINC2Q96SA4 455 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 IL1RAPQ9NPH3 570 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 MKKSQ9NPJ1 570 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 SMPD3Q9NY59 655 aaPredicted RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 TCFL5Q9UL49 500 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 V9GYQ6 96 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 MAP1BP46821 2468 aaKnown RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 LOC400499M0QZD8 3231 aa14.62□□□□□ -0.07
SHOX2-202ENST00000425436 DSPP15924 2871 aaKnown RBP14.62□□□□□ -0.07
SHOX2-202ENST00000425436 A0A087WV48 116 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 VSTM2BA6NLU5 285 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 G3V2T6 193 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 H0YAE9 185 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 NKX2-8O15522 239 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CDC123O75794 336 aaPredicted RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 BMP10O95393 424 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ZNF10P21506 573 aaPredicted RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ALDH3A2P51648 485 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 SKP1P63208 163 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 GAB1Q13480 694 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 MPEG1Q2M385 716 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 KRT80Q6KB66 452 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 NIPAL1Q6NVV3 410 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CARM1Q86X55 608 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 HIPK1Q86Z02 1210 aa14.61□□□□□ -0.07
SHOX2-202ENST00000425436 ZC3H7AQ8IWR0 971 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 CHERPQ8IWX8 916 aaKnown RBP14.61□□□□□ -0.07
SHOX2-202ENST00000425436 C10orf111Q8N326 155 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms