RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ANKRD33BA6NCL7 494 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 PRRG2O14669 202 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 TRIM3O75382 744 aaPredicted RBP16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 TPOP07202 933 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 ABCB1P08183 1280 aaPredicted RBP16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 FGF4P08620 206 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 ESRRAP11474 423 aaPredicted RBP16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 GRNP28799 593 aaKnown RBP16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 FNDC7Q5VTL7 733 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 MTFR2Q6P444 385 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 ARHGAP11AQ6P4F7 1023 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 RPTNQ6XPR3 784 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 TRILQ7L0X0 811 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 TICAM1Q8IUC6 712 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 RPRMLQ8N4K4 120 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 OR7G2Q8NG99 324 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 CDC26Q8NHZ8 85 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 HGDQ93099 445 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 LCORQ96JN0 433 aaPredicted RBP16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 SMC6Q96SB8 1091 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 ZNF703Q9H7S9 590 aaPredicted RBP16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 ZFP64Q9NPA5 681 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 PFDN4Q9NQP4 134 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 TAS2R7Q9NYW3 318 aa16.37■□□□□ 0.21
SBDSP1-202ENST00000423945 ATP6AP2A0A1C7CYW4 349 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 E9PLN8 166 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 SLC28A1O00337 649 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 SEC22BO75396 215 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 PPM1BO75688 479 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 ATP6AP2O75787 350 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 BPGMP07738 259 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 LINC00032P0C843 101 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 ENDOUP21128 410 aaKnown RBP16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 CASP3P42574 277 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 KCNJ2P63252 427 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 ART3Q13508 389 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 KRT71Q3SY84 523 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 TNFAIP8L3Q5GJ75 292 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 PHF10Q8WUB8 498 aaKnown RBP16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 DIO2Q92813 273 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 ZBTB9Q96C00 473 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 METTL2AQ96IZ6 378 aaKnown RBP16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 VKORC1Q9BQB6 163 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 ANGPTL4Q9BY76 406 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 LRTM1Q9HBL6 345 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 C1orf109Q9NX04 203 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 TNFRSF10DQ9UBN6 386 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 ENTPD4Q9Y227 616 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 CFL2Q9Y281 166 aa16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 GPR55Q9Y2T6 319 aaPredicted RBP16.36■□□□□ 0.21
SBDSP1-202ENST00000423945 TP53I11O14683 189 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 LSM1O15116 133 aaKnown RBP16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 TO15178 435 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 PLOD3O60568 738 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 NAGAP17050 411 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 DRD5P21918 477 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 PTGDSP41222 190 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 PPICP45877 212 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 NRG3P56975 720 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 RFTN2Q52LD8 501 aaPredicted RBP16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 NPSR1Q6W5P4 371 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 EXOC3L1Q86VI1 746 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 SAMD14Q8IZD0 417 aaPredicted RBP16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 FAM9CQ8IZT9 166 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 TWIST2Q8WVJ9 160 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 ERP27Q96DN0 273 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 OMA1Q96E52 524 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 HSPBAP1Q96EW2 488 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 VSTM2LQ96N03 204 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 RILPQ96NA2 401 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 ZIM3Q96PE6 472 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 BTBD9Q96Q07 612 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 NODALQ96S42 347 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 SECISBP2Q96T21 854 aaKnown RBP16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 DOHHQ9BU89 302 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 PNPLA3Q9NST1 481 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 SPRR3Q9UBC9 169 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 PRODH2Q9UF12 536 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 GIMAP2Q9UG22 337 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 BOKQ9UMX3 212 aaPredicted RBP16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 WBP11Q9Y2W2 641 aaKnown RBP16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 TRAF6Q9Y4K3 522 aa16.35■□□□□ 0.21
SBDSP1-202ENST00000423945 NOTCH2Q04721 2471 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 FRG2CA6NGY1 282 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 CAPN14A8MX76 684 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 PRSS44E7EML9 344 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 NPIPA2E9PIF3 369 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 NPIPA3F8WFD2 350 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 PIP5K1BO14986 540 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 RGS14O43566 566 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 JUNP05412 331 aaKnown RBP16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 CT45A8P0DMV1 189 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 CT45A9P0DMV2 189 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 SDC1P18827 310 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 MPIP34949 423 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 TMED10P49755 219 aaKnown RBP16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 CORO7P57737 925 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 SLC10A1Q14973 349 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 ZNF385BQ569K4 471 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 CT45A2Q5DJT8 189 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms