RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PAQR8Q8TEZ7 354 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 C3orf30Q96M34 536 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 GPR137Q96N19 417 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 AMDHD1Q96NU7 426 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 SORT1Q99523 831 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 C1orf50Q9BV19 199 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 ITPAQ9BY32 194 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 GLIPR2Q9H4G4 154 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
CHD1-202ENST00000414220 C3orf14Q9HBI5 128 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 ACSS1Q9NUB1 689 aaPredicted RBP13.57□□□□□ -0.24
CHD1-202ENST00000414220 NPIPA1Q9UND3 350 aa13.57□□□□□ -0.24
CHD1-202ENST00000414220 FRG2CA6NGY1 282 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 KLF11O14901 512 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 SCAMP2O15127 329 aaKnown RBP13.56□□□□□ -0.24
CHD1-202ENST00000414220 HDAC3O15379 428 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 LBPP18428 481 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 PER3P56645 1201 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 GPR85P60893 370 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 LSM12Q3MHD2 195 aaKnown RBP13.56□□□□□ -0.24
CHD1-202ENST00000414220 TMEM198Q66K66 360 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 TMEM107Q6UX40 140 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 GHDCQ8N2G8 530 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 FBXW8Q8N3Y1 598 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 ZNF441Q8N8Z8 693 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 OR2M7Q8NG81 312 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 DIO2Q92813 273 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 MAGED4Q96JG8 741 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 SH3GL2Q99962 352 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 C20orf27Q9GZN8 174 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 NXF5Q9H1B4 397 aaKnown RBP13.56□□□□□ -0.24
CHD1-202ENST00000414220 AKTIPQ9H8T0 292 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 PNPOQ9NVS9 261 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 ASIC5Q9NY37 505 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 B4GALT7Q9UBV7 327 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 ATP6V1HQ9UI12 483 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 BOKQ9UMX3 212 aaPredicted RBP13.56□□□□□ -0.24
CHD1-202ENST00000414220 C19orf53Q9UNZ5 99 aaPredicted RBP13.56□□□□□ -0.24
CHD1-202ENST00000414220 OSGIN2Q9Y236 505 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 OR10H1Q9Y4A9 318 aa13.56□□□□□ -0.24
CHD1-202ENST00000414220 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
CHD1-202ENST00000414220 BSNQ9UPA5 3926 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 A0A1B0GUH1 482 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 ASNA1O43681 348 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 ZNF354AO60765 605 aaPredicted RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 ABCB7O75027 752 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 SNNO75324 88 aaPredicted RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 ERN1O75460 977 aaKnown RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 PPM1BO75688 479 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 SNX4O95219 450 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 MST1P26927 711 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 ABCD3P28288 659 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 PTGER1P34995 402 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 MC3RP41968 323 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 EMDP50402 254 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 PSMD4P55036 377 aaKnown RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 PPIAP62937 165 aaKnown RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 ZNF155Q12901 538 aaPredicted RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 HSPB3Q12988 150 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 PDE7AQ13946 482 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 UBAP2LQ14157 1087 aaKnown RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 MLC1Q15049 377 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 VPS26BQ4G0F5 336 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 ANKRD26P1Q6NSI1 321 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 SLC34A3Q8N130 599 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 EID3Q8N140 333 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 VPS37AQ8NEZ2 397 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 OR7G2Q8NG99 324 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 OR10G3Q8NGC4 313 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 OR5M3Q8NGP4 307 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 ELP4Q96EB1 424 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 DTNBP1Q96EV8 351 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 DOHHQ9BU89 302 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 DPY30Q9C005 99 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 MEAF6Q9HAF1 191 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 IL1RL2Q9HB29 575 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 FOLH1BQ9HBA9 442 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 SLC5A6Q9Y289 635 aa13.55□□□□□ -0.24
CHD1-202ENST00000414220 GPR55Q9Y2T6 319 aaPredicted RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.55□□□□□ -0.24
CHD1-202ENST00000414220 A0A1W2PRB8 838 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 ANKRD33BA6NCL7 494 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 TO15178 435 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 REM1O75628 298 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 CCL3P10147 92 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 KITP10721 976 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 G6PDP11413 515 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 ABOP16442 354 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 IL12BP29460 328 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 MASP1P48740 699 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 CLDN8P56748 225 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 PPP2R2AP63151 447 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 PRR5P85299 388 aa13.54□□□□□ -0.24
CHD1-202ENST00000414220 EFR3AQ14156 821 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms