RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 MTDHQ86UE4 582 aaKnown RBP28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 ARMC10Q8N2F6 343 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 FOLH1BQ9HBA9 442 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 C3orf14Q9HBI5 128 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 ZCCHC3Q9NUD5 404 aaKnown RBP28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 ANKRD10Q9NXR5 420 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 CNTRLQ7Z7A1 2325 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 FCHO1O14526 889 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 FAM107AO95990 144 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 ALPPP05187 535 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 GSNP06396 782 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 CCT3P49368 545 aaKnown RBP28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 KLF10Q13118 480 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 MFAP5Q13361 173 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 LY6DQ14210 128 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 SPDYE7PQ495Y7 208 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 PANX1Q96RD7 426 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 TMEM45AQ9NWC5 275 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 NTMQ9P121 344 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 PRODH2Q9UF12 536 aa28.32■■■□□ 2.12
CSNK1E-206ENST00000413574 GIMAP1-GIMAP5A0A087WTJ2 511 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 C1QCP02747 245 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 MAPKAPK3Q16644 382 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 HLA-DQA1Q5Y7H0 255 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 ZNF441Q8N8Z8 693 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 GIMAP5Q96F15 307 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 VSTM2LQ96N03 204 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 ADNPQ9H2P0 1102 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 SLC6A13Q9NSD5 602 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 CFL2Q9Y281 166 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 IGSF10Q6WRI0 2623 aa28.31■■■□□ 2.12
CSNK1E-206ENST00000413574 COQ9O75208 318 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 IFI6P09912 130 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 CD97P48960 835 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 NR0B1P51843 470 aaKnown RBP28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 CORO7P57737 925 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 ZNF155Q12901 538 aaPredicted RBP28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 GAB1Q13480 694 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 ZNF468Q5VIY5 522 aaPredicted RBP28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 DNAJC14Q6Y2X3 702 aaPredicted RBP28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 C9orf43Q8TAL5 461 aaPredicted RBP28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 C16orf58Q96GQ5 468 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 RASL10BQ96S79 203 aa28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 NXF5Q9H1B4 397 aaKnown RBP28.3■■■□□ 2.12
CSNK1E-206ENST00000413574 WDPCPO95876 746 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 PRR5P85299 388 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 TP53BP2Q13625 1128 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 TLR1Q15399 786 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 TMEM64Q6YI46 380 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 GOT1L1Q8NHS2 421 aaPredicted RBP28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 GTF2H4Q92759 462 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 LMF1Q96S06 567 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 TUBD1Q9UJT1 453 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 ARL2BPQ9Y2Y0 163 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 CSAG2Q9Y5P2 127 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 CCDC22O60826 627 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 PAGE3Q5JUK9 113 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 IGFL2Q6UWQ7 119 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 MSANTD1Q6ZTZ1 278 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 LGI4Q8N135 537 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 FBXO30Q8TB52 745 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 MS4A4EQ96PG1 132 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 YIPF4Q9BSR8 244 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 RMND5AQ9H871 391 aa28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 YARS2Q9Y2Z4 477 aaKnown RBP28.29■■■□□ 2.12
CSNK1E-206ENST00000413574 ATRXP46100 2492 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 SPENQ96T58 3664 aaKnown RBP28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 RNF103-CHMP3A0A140T963 221 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 RFXANKO14593 260 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 ERN1O75460 977 aaKnown RBP28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 NADKO95544 446 aaPredicted RBP28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 PIGGQ5H8A4 983 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 C6orf10Q5SRN2 563 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 NPSR1Q6W5P4 371 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 ZNF621Q6ZSS3 439 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 ASB18Q6ZVZ8 466 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 OTUB1Q96FW1 271 aaPredicted RBP28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 ITCHQ96J02 903 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 EPS8L2Q9H6S3 715 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 GPR55Q9Y2T6 319 aaPredicted RBP28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 ZNF451Q9Y4E5 1061 aa28.28■■■□□ 2.12
CSNK1E-206ENST00000413574 A0A1W2PP18 115 aa28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 HMGN2P05204 90 aaKnown RBP28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 CT45A8P0DMV1 189 aa28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 CT45A9P0DMV2 189 aa28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 CT45A2Q5DJT8 189 aa28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 SFXN5Q8TD22 340 aa28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 LCORQ96JN0 433 aaPredicted RBP28.27■■■□□ 2.12
CSNK1E-206ENST00000413574 SNRPB2P08579 225 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 UQCRC2P22695 453 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 SOX3P41225 446 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 PPICP45877 212 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 SSR4P51571 173 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 CASP9P55211 416 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 PSG6Q00889 435 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 LRRC74AQ0VAA2 488 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 LASP1Q14847 261 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 GTDC1Q4AE62 458 aa28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 LACTB2Q53H82 288 aaPredicted RBP28.26■■■□□ 2.11
CSNK1E-206ENST00000413574 MFSD12Q6NUT3 480 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms