RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 PTGDSP41222 190 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 HEPACAMQ14CZ8 416 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 UGT3A2Q3SY77 523 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 MTFR2Q6P444 385 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 NPSR1Q6W5P4 371 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 TICAM1Q8IUC6 712 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 OR7G2Q8NG99 324 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 OR5M9Q8NGP3 310 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 PHF10Q8WUB8 498 aaKnown RBP17.48■□□□□ 0.39
SF3A1-202ENST00000411423 DIO2Q92813 273 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 LCORQ96JN0 433 aaPredicted RBP17.48■□□□□ 0.39
SF3A1-202ENST00000411423 FCRL1Q96LA6 429 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 JSRP1Q96MG2 331 aaPredicted RBP17.48■□□□□ 0.39
SF3A1-202ENST00000411423 NODALQ96S42 347 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 DOHHQ9BU89 302 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 TMEM109Q9BVC6 243 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 MYNNQ9NPC7 610 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 EHD3Q9NZN3 535 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 MID2Q9UJV3 735 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 RAB21Q9UL25 225 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 DNAJC15Q9Y5T4 150 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 NAV2Q8IVL1 2488 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 NINQ8N4C6 2090 aa17.48■□□□□ 0.39
SF3A1-202ENST00000411423 MYO1GB0I1T2 1018 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 NPIPB8E9PQR5 432 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 HTR1EP28566 365 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 CASP3P42574 277 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 ETV4P43268 484 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 CORO7P57737 925 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF844Q08AG5 666 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 GXYLT1Q4G148 440 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 ARL13AQ5H913 290 aaPredicted RBP17.47■□□□□ 0.39
SF3A1-202ENST00000411423 XKRXQ6PP77 449 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 OMA1Q96E52 524 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 RILPQ96NA2 401 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 SMC6Q96SB8 1091 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 ANGPTL4Q9BY76 406 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 SLC6A15Q9H2J7 730 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 RRAGDQ9NQL2 400 aaPredicted RBP17.47■□□□□ 0.39
SF3A1-202ENST00000411423 GIMAP2Q9UG22 337 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 KLF2Q9Y5W3 355 aaPredicted RBP17.47■□□□□ 0.39
SF3A1-202ENST00000411423 PCNX1Q96RV3 2341 aa17.47■□□□□ 0.39
SF3A1-202ENST00000411423 FBN2P35556 2912 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 ANKRD33BA6NCL7 494 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 AQP7O14520 342 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 NPHS1O60500 1241 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 UGT2B11O75310 529 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 PPM1BO75688 479 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 JUNP05412 331 aaKnown RBP17.46■□□□□ 0.39
SF3A1-202ENST00000411423 LINC00032P0C843 101 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 CT45A8P0DMV1 189 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 CT45A9P0DMV2 189 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 PPICP45877 212 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 SLC10A1Q14973 349 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF630Q2M218 657 aaPredicted RBP17.46■□□□□ 0.39
SF3A1-202ENST00000411423 ZNF385BQ569K4 471 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 CT45A2Q5DJT8 189 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 RTL6Q6ICC9 239 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 ANKRD26P1Q6NSI1 321 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 RNF165Q6ZSG1 346 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 OR6Y1Q8NGX8 325 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 FAM76AQ8TAV0 307 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 VSTM2LQ96N03 204 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 IQCGQ9H095 443 aaKnown RBP17.46■□□□□ 0.39
SF3A1-202ENST00000411423 GLIPR2Q9H4G4 154 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 LRTM1Q9HBL6 345 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 BOKQ9UMX3 212 aaPredicted RBP17.46■□□□□ 0.39
SF3A1-202ENST00000411423 ENTPD4Q9Y227 616 aa17.46■□□□□ 0.39
SF3A1-202ENST00000411423 GPR55Q9Y2T6 319 aaPredicted RBP17.46■□□□□ 0.39
SF3A1-202ENST00000411423 ADGRG4Q8IZF6 3080 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 C2orf72A6NCS6 295 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 FRG2CA6NGY1 282 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 SLC28A1O00337 649 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 TP53I11O14683 189 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 LSM1O15116 133 aaKnown RBP17.45■□□□□ 0.38
SF3A1-202ENST00000411423 TO15178 435 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 SEC22BO75396 215 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 AGAP20933 346 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 DRD5P21918 477 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 GSTM5P46439 218 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 TRPC1P48995 793 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 NRG3P56975 720 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 RFTN2Q52LD8 501 aaPredicted RBP17.45■□□□□ 0.38
SF3A1-202ENST00000411423 PAOXQ6QHF9 649 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 FAM9CQ8IZT9 166 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 OR4N2Q8NGD1 307 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 AGR3Q8TD06 166 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 GFM2Q969S9 779 aaKnown RBP17.45■□□□□ 0.38
SF3A1-202ENST00000411423 HSPBAP1Q96EW2 488 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 GNRHR2Q96P88 292 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 BTBD9Q96Q07 612 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 SECISBP2Q96T21 854 aaKnown RBP17.45■□□□□ 0.38
SF3A1-202ENST00000411423 TRMOQ9BU70 441 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 UBQLN3Q9H347 655 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 TP63Q9H3D4 680 aaPredicted RBP17.45■□□□□ 0.38
SF3A1-202ENST00000411423 FOLH1BQ9HBA9 442 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 GALNT9Q9HCQ5 603 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 RYDENQ9NUL5 291 aaKnown RBP17.45■□□□□ 0.38
SF3A1-202ENST00000411423 C1orf109Q9NX04 203 aa17.45■□□□□ 0.38
SF3A1-202ENST00000411423 TAS2R7Q9NYW3 318 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms