RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ITGAMP11215 1152 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 DRD5P21918 477 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 PPICP45877 212 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 MNAT1P51948 309 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 DCAF7P61962 342 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 TXNL4AP83876 142 aaKnown RBP14.12□□□□□ -0.15
LSM5-207ENST00000410044 GAB1Q13480 694 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 EBPQ15125 230 aaKnown RBP14.12□□□□□ -0.15
LSM5-207ENST00000410044 TRMT5Q32P41 509 aaKnown RBP14.12□□□□□ -0.15
LSM5-207ENST00000410044 C8orf82Q6P1X6 216 aaPredicted RBP14.12□□□□□ -0.15
LSM5-207ENST00000410044 SLC29A4Q7RTT9 530 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 C9orf40Q8IXQ3 194 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 ZNF441Q8N8Z8 693 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 CLEC1AQ8NC01 280 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 OR5L2Q8NGL0 311 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 RCN3Q96D15 328 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 VSTM2LQ96N03 204 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 ANKRD27Q96NW4 1050 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 MS4A4EQ96PG1 132 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 CGREF1Q99674 301 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 LMF2Q9BU23 707 aaKnown RBP14.12□□□□□ -0.15
LSM5-207ENST00000410044 LHPPQ9H008 270 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 ING2Q9H160 280 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 TPT1P8Q9HAU6 139 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 GPR55Q9Y2T6 319 aaPredicted RBP14.12□□□□□ -0.15
LSM5-207ENST00000410044 CEP295Q9C0D2 2601 aa14.12□□□□□ -0.15
LSM5-207ENST00000410044 TRBV11-1A0A0K0K1C0 115 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 RNF103-CHMP3A0A140T963 221 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 C2orf92A0A1B0GVN3 265 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 ARGFXA6NJG6 315 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 FXYD1O00168 92 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 CLIC1O00299 241 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 CDK2AP1O14519 115 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 PRKNO60260 465 aaPredicted RBP14.11□□□□□ -0.15
LSM5-207ENST00000410044 CEACAM4O75871 244 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 HMGN2P05204 90 aaKnown RBP14.11□□□□□ -0.15
LSM5-207ENST00000410044 CELA2AP08217 269 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 GPX2P18283 190 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 CALB2P22676 271 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 PPIBP23284 216 aaKnown RBP14.11□□□□□ -0.15
LSM5-207ENST00000410044 MAN2A2P49641 1150 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 PRIM2P49643 509 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 MVDP53602 400 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 PSG6Q00889 435 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 GABPB1Q06547 395 aaPredicted RBP14.11□□□□□ -0.15
LSM5-207ENST00000410044 NFYCQ13952 458 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 DEFB109BQ30KR1 87 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 SPDYE7PQ495Y7 208 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 GTDC1Q4AE62 458 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 MFSD12Q6NUT3 480 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 CDC73Q6P1J9 531 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 GPR155Q7Z3F1 870 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 DHDDSQ86SQ9 333 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 LGI4Q8N135 537 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 KIF2BQ8N4N8 673 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 CDRT4Q8N9R6 151 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 THOC3Q96J01 351 aaKnown RBP14.11□□□□□ -0.15
LSM5-207ENST00000410044 MAGED4Q96JG8 741 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 BTBD9Q96Q07 612 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 GPATCH1Q9BRR8 931 aaKnown RBP14.11□□□□□ -0.15
LSM5-207ENST00000410044 ACTRT3Q9BYD9 372 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 DEFB126Q9BYW3 111 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 FOLH1BQ9HBA9 442 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 CPNE5Q9HCH3 593 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 FRYQ5TBA9 3013 aa14.11□□□□□ -0.15
LSM5-207ENST00000410044 AIM2O14862 343 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 TO15178 435 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 NKX2-2O95096 273 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 UNC5CO95185 931 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 CBX6O95503 412 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 KRT16P08779 473 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 CT45A8P0DMV1 189 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 CT45A9P0DMV2 189 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 ESRRAP11474 423 aaPredicted RBP14.1□□□□□ -0.15
LSM5-207ENST00000410044 MATN1P21941 496 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 SOAT1P35610 550 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 PRKAG1P54619 331 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 PSPHP78330 225 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 TP53BP2Q13625 1128 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 CT45A2Q5DJT8 189 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 CLEC4FQ8N1N0 589 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 GALNT16Q8N428 558 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 OR52N2Q8NGI0 321 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 OR5AK3PQ8NH89 298 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 APOBEC4Q8WW27 367 aaKnown RBP14.1□□□□□ -0.15
LSM5-207ENST00000410044 C16orf58Q96GQ5 468 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 STACQ99469 402 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 HOPXQ9BPY8 73 aaPredicted RBP14.1□□□□□ -0.15
LSM5-207ENST00000410044 WWTR1Q9GZV5 400 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 RAD21L1Q9H4I0 556 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 MYOTQ9UBF9 498 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 DTX4Q9Y2E6 619 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 DMXL2Q8TDJ6 3036 aa14.1□□□□□ -0.15
LSM5-207ENST00000410044 DUXAA6NLW8 204 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 ASNA1O43681 348 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 UBOX5O94941 541 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 C1QCP02747 245 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 BMP2P12643 396 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 CHI3L1P36222 383 aaPredicted RBP14.09□□□□□ -0.15
LSM5-207ENST00000410044 MLF1P58340 268 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms