RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MC1RQ01726 317 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 EEF1A2Q05639 463 aaKnown RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 RAPSNQ13702 412 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SLC9A5Q14940 896 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 MAD2L1BPQ15013 274 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 MOGQ16653 247 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 C4orf17Q53FE4 359 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 MLIPQ5VWP3 458 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ADNP2Q6IQ32 1131 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PRSS48Q7RTY5 328 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 VN1R5Q7Z5H4 357 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 GALNT5Q7Z7M9 940 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 KRT73Q86Y46 540 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 OR10G2Q8NGC3 310 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ZDHHC1Q8WTX9 485 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 BORCS5Q969J3 196 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 CIDECQ96AQ7 238 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PRAP1Q96NZ9 151 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 F2RL3Q96RI0 385 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 INSM2Q96T92 566 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SARGQ9BW04 601 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ACAT2Q9BWD1 397 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ROGDIQ9GZN7 287 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SPNS1Q9H2V7 528 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PALMDQ9NP74 551 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 STARD5Q9NSY2 213 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 VNN3Q9NY84 501 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 NDUFAF4Q9P032 175 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PLAGL1Q9UM63 463 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 CDC14AQ9UNH5 594 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 MAP4K5Q9Y4K4 846 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SNX8Q9Y5X2 465 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 LYVE1Q9Y5Y7 322 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ENPP4Q9Y6X5 453 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ARHGEF17Q96PE2 2063 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SPTAN1Q13813 2472 aaKnown RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 NOTCH2Q04721 2471 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 FLNCQ14315 2725 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 TRBV23OR9-2A0A075B6M9 112 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 PRR19A6NJB7 356 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC22A1O15245 554 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 EFSO43281 561 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 CCNB2O95067 398 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 GADD45GO95257 159 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 EML2O95834 649 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 GBAP04062 536 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 NUDT7P0C024 238 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 F3P13726 295 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 EFNA1P20827 205 aaPredicted RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 PCSK6P29122 969 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 GGT2P36268 569 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 SSR2P43308 183 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 PCBP3P57721 371 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 STXBP1P61764 594 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 RPP38P78345 283 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 CSNK1G2P78368 415 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 HPCAP84074 193 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 OCA2Q04671 838 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 TLE1Q04724 770 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 NPTX1Q15818 432 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 CTU2Q2VPK5 515 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 IQCCQ4KMZ1 466 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 OGFOD3Q6PK18 319 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 CEACAM20Q6UY09 585 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 WASH2PQ6VEQ5 465 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 ARHGAP22Q7Z5H3 698 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 ADCK2Q7Z695 626 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 SAMD14Q8IZD0 417 aaPredicted RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 TAGAPQ8N103 731 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF740Q8NDX6 193 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 PSMA8Q8TAA3 256 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 SFXN5Q8TD22 340 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 LHPPQ9H008 270 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 KIR3DX1Q9H7L2 352 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 NECTIN3Q9NQS3 549 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 TBC1D23Q9NUY8 699 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 LYARQ9NX58 379 aaKnown RBP12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 P2RX2Q9UBL9 471 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
SMARCB1-203ENST00000407082 A0A1W2PPV9 198 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 AQP1P29972 269 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 GPC1P35052 558 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 KRT20P35900 424 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 XCR1P46094 333 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 CCT3P49368 545 aaKnown RBP12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 KHKP50053 298 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 PLA2G16P53816 162 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 CDC42P60953 191 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 SLC35A2P78381 396 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 CLCA4Q14CN2 919 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 C11orf91Q3C1V1 193 aa12.13□□□□□ -0.47
SMARCB1-203ENST00000407082 ZNF829Q3KNS6 432 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms