RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FANCFQ9NPI8 374 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 TRPV5Q9NQA5 729 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 C6orf203Q9P0P8 240 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 MBD2Q9UBB5 411 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 ZMAT5Q9UDW3 170 aaKnown RBP4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 LNPEPQ9UIQ6 1025 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 TCF19Q9Y242 345 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 SYNJ2O15056 1496 aa4.16□□□□□ -1.74
HMGB1P13-201ENST00000406019 MYH15Q9Y2K3 1946 aa4.15□□□□□ -1.74
HMGB1P13-201ENST00000406019 IGHV3-20A0A0C4DH32 117 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FBLL1A6NHQ2 334 aaKnown RBP4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 CYSRT1A8MQ03 144 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF724A8MTY0 619 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 WASH3PC4AMC7 463 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM72CH0Y354 149 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 K7EQM0 130 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 MTRF1O75570 445 aaKnown RBP4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 RHOBTB1O94844 696 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 UFL1O94874 794 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 IGHEP01854 428 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ANXA4P09525 319 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 RPA2P15927 270 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 GNB3P16520 340 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ATP6V1C1P21283 382 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 MAP2K2P36507 400 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 DLSTP36957 453 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 MAGEA8P43361 318 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 CRYBA2P53672 197 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 NAPAP54920 295 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 RBBP4Q09028 425 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 SGSM1Q2NKQ1 1148 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FFAR4Q5NUL3 377 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM72AQ5TYM5 149 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM72DQ6L9T8 149 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ADAM5Q6NVV9 412 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 LEG1Q6P5S2 330 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 WASH2PQ6VEQ5 465 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 Q6ZRP5 223 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FAM72BQ86X60 149 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF679Q8IYX0 411 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 MNS1Q8NEH6 495 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR4F5Q8NH21 305 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 RLN3Q8WXF3 142 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 LRR1Q96L50 414 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF607Q96SK3 696 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 CPXM1Q96SM3 734 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 EPYCQ99645 322 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 SLC39A3Q9BRY0 314 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 NMUR1Q9HB89 426 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 GDAP2Q9NXN4 497 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 IKZF3Q9UKT9 509 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 FZR1Q9UM11 496 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZHX2Q9Y6X8 837 aa4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 V9GYY5 206 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P13-201ENST00000406019 A0A0A6YYD4 124 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 C15orf38-AP3S2A0A0A6YYH1 394 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 G3V2L1 256 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 H0YL77 283 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 K7EQD1 137 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 IMPA2O14732 288 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ALOX15BO15296 676 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 INPP4BO15327 924 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 MTX2O75431 263 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 SLC35G4P0C7Q5 338 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 PATE4P0C8F1 98 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CYLC1P35663 651 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 TSFMP43897 325 aaKnown RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 DHPSP49366 369 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 SH3BGRP55822 239 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ABCE1P61221 599 aaKnown RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 MRPS6P82932 125 aaKnown RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZP4Q12836 540 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ENPP2Q13822 863 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 DMKNQ6E0U4 476 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ZNF562Q6V9R5 426 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CENPUQ71F23 418 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 LPCAT2Q7L5N7 544 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CHMP1BQ7LBR1 199 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 EFCAB13Q8IY85 973 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 PYROXD2Q8N2H3 581 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 RAB42Q8N4Z0 105 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 OR5AU1Q8NGC0 362 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ANKRD49Q8WVL7 239 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CNDP1Q96KN2 507 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 TBCDQ9BTW9 1192 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ALG12Q9BV10 488 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 EDEM2Q9BV94 578 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 ALG9Q9H6U8 611 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 LPAR2Q9HBW0 351 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 TEX10Q9NXF1 929 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 GPR83Q9NYM4 423 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 KLHL8Q9P2G9 620 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CFAP45Q9UL16 551 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CSNK1G3Q9Y6M4 447 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 CARMIL1Q5VZK9 1371 aa4.14□□□□□ -1.75
HMGB1P13-201ENST00000406019 PTCH1Q13635 1447 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 IQCMA0A1B0GVH7 501 aa4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 MBLAC1A4D2B0 266 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P13-201ENST00000406019 ASB14A6NK59 587 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms