RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 NIT2Q9NQR4 276 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 AGPAT5Q9NUQ2 364 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 RNF150Q9ULK6 438 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 LOC105369274A0A096LPK9 316 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OOEPA6NGQ2 149 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ITGB8P26012 769 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SSTR1P30872 391 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CASP3P42574 277 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GABRA4P48169 554 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GBE1Q04446 702 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GPR176Q14439 515 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MPZL3Q6UWV2 235 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 NLRC3Q7RTR2 1065 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ZNF573Q86YE8 665 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR4N4Q8N0Y3 316 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ACBD7Q8N6N7 88 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR1J1Q8NGS3 322 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 LCN9Q8WX39 176 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ZNF582Q96NG8 517 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SOX7Q9BT81 388 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ARV1Q9H2C2 271 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 TESQ9UGI8 421 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CLEC4EQ9ULY5 219 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ALPK2Q86TB3 2170 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 RGL2O15211 777 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 HNRNPA2B1P22626 353 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 RPL11P62913 178 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GRB7Q14451 532 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR8J1Q8NGP2 316 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CELF1Q92879 486 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PGAM5Q96HS1 289 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 AKR1E2Q96JD6 320 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 METTL7AQ9H8H3 244 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GBA2Q9HCG7 927 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SNX15Q9NRS6 342 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ETNK2Q9NVF9 386 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 VAPAQ9P0L0 249 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CLCF1Q9UBD9 225 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GPR39O43194 453 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 VEGFDO43915 354 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 NUDT17P0C025 328 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 IL13RA1P78552 427 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SLAMF1Q13291 335 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR2T5Q6IEZ7 315 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CMASQ8NFW8 434 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR2T29Q8NH02 315 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 TBX5Q99593 518 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PINK1Q9BXM7 581 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 HPGDSO60760 199 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 F2P00734 622 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MFGE8Q08431 387 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 DAG1Q14118 895 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ENDOGQ14249 297 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 TMEM156Q8N614 296 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR52H1Q8NGJ2 320 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR2T35Q8NGX2 323 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 DTD1Q8TEA8 209 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 APH1BQ8WW43 257 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 APOLD1Q96LR9 279 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CITED2Q99967 270 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MICU1Q9BPX6 476 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 GPN2Q9H9Y4 310 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PURGQ9UJV8 347 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 DEGS1O15121 323 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 APBA3O96018 575 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 FBP1P09467 338 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 POU2F1P14859 743 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 RPE65Q16518 533 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ARL13AQ5H913 290 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 FIGNQ5HY92 759 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ANGEL2Q5VTE6 544 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 FAM122BQ7Z309 247 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CHRDQ9H2X0 955 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 UCK1Q9HA47 277 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MYEF2Q9P2K5 600 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ACOT7O00154 380 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PLRG1O43660 514 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ABCB7O75027 752 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MMP3P08254 477 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ARG2P78540 354 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MRPS6P82932 125 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MTF1Q14872 753 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 FJX1Q86VR8 437 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ZNF100Q8IYN0 542 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 TWIST2Q8WVJ9 160 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MAP3K3Q99759 626 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SPACA1Q9HBV2 294 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 POLD4Q9HCU8 107 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PDE7BQ9NP56 450 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SLC17A6Q9P2U8 582 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CPNE7Q9UBL6 633 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 MSRAQ9UJ68 235 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 VIRMAQ69YN4 1812 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PMS2P1A4D2B8 440 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PLSCR1O15162 318 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 EPHA1P21709 976 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 HTR7P34969 479 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms