RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PRKCDQ05655 676 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 FHL5Q5TD97 284 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 FBXO42Q6P3S6 717 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 CLIP4Q8N3C7 705 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 OR52I1Q8NGK6 324 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 OR9A2Q8NGT5 310 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 ELP4Q96EB1 424 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 TIMP4Q99727 224 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 EGLN3Q9H6Z9 239 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 NDUFB11Q9NX14 153 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 V9GYH0 126 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 RPS19P39019 145 aaKnown RBP14.45□□□□□ -0.1
CPSF7-202ENST00000394888 SSR2P43308 183 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 CDC42P60953 191 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 RPS21P63220 83 aaKnown RBP14.45□□□□□ -0.1
CPSF7-202ENST00000394888 HYAL1Q12794 435 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 SLC13A2Q13183 592 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 DCST1Q5T197 706 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 ADCK1Q86TW2 530 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 VRK2Q86Y07 508 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 OR1E3Q8WZA6 343 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 CHCHD6Q9BRQ6 235 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 MRPS30Q9NP92 439 aaKnown RBP14.45□□□□□ -0.1
CPSF7-202ENST00000394888 ZCCHC3Q9NUD5 404 aaKnown RBP14.45□□□□□ -0.1
CPSF7-202ENST00000394888 CLEC1BQ9P126 229 aa14.45□□□□□ -0.1
CPSF7-202ENST00000394888 FRS3O43559 492 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 FCMRO60667 390 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 CTSVO60911 334 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 TIE1P35590 1138 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 MC3RP41968 323 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 FXYD6P3P58550 94 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 VASNQ6EMK4 673 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 PRICKLE2Q7Z3G6 844 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 SLC22A16Q86VW1 577 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 PRRC1Q96M27 445 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF582Q96NG8 517 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 TRNT1Q96Q11 434 aaKnown RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 POLDIP3Q9BY77 421 aaKnown RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 EVA1BQ9NVM1 165 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 SEC14L3Q9UDX4 400 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 PILRAQ9UKJ1 303 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 CHRM5P08912 532 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 CDH3P22223 829 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 XKP51811 444 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 CHRNEQ04844 493 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 LASP1Q14847 261 aaKnown RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 SFTPA2Q8IWL1 248 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 STX19Q8N4C7 294 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 OR7G2Q8NG99 324 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 OR4K5Q8NGD3 323 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 XAGE5Q8WWM1 108 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 SLC35A4Q96G79 324 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 BMFQ96LC9 184 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 OSGEPL1Q9H4B0 414 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 FBXL12Q9NXK8 326 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 PRSS38A1L453 326 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 TAF4O00268 1085 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 AQP9O43315 295 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 DLX2Q07687 328 aaPredicted RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 FCRL6Q6DN72 434 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 DCLRE1CQ96SD1 692 aaKnown RBP14.44□□□□□ -0.1
CPSF7-202ENST00000394888 RMI1Q9H9A7 625 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 NUP210LQ5VU65 1888 aa14.44□□□□□ -0.1
CPSF7-202ENST00000394888 H3BQ06 376 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 MPZL2O60487 215 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 CSTF2P33240 577 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 CLDN2P57739 230 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 TARDBPQ13148 414 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF79Q15937 498 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 ARHGEF39Q8N4T4 335 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 TCEANCQ8N8B7 351 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF556Q9HAH1 456 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 KCNE5Q9UJ90 142 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 PCOLCE2Q9UKZ9 415 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 TBC1D24Q9ULP9 559 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 AK4P27144 223 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 LSSP48449 732 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 RAB8AP61006 207 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 NCF4Q15080 339 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 FRRS1Q6ZNA5 592 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 TMEM145Q8NBT3 493 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 C9orf43Q8TAL5 461 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 BBS10Q8TAM1 723 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 NT5CQ8TCD5 201 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 ASB15Q8WXK1 588 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 OR2A14Q96R47 310 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 IL21RQ9HBE5 538 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 IMPAD1Q9NX62 359 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 MRPS2Q9Y399 296 aaKnown RBP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 FAM32AQ9Y421 112 aaKnown RBP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 LOC100506127A0A0U1RQW1 187 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 CCRL2O00421 344 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 CTDSP2O14595 271 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 OR10H3O60404 316 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 PDE9AO76083 593 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 GTF2E2P29084 291 aaKnown RBP14.43□□□□□ -0.1
CPSF7-202ENST00000394888 PDX1P52945 283 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 IQCHQ86VS3 1027 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 TMEM52Q8NDY8 209 aa14.43□□□□□ -0.1
CPSF7-202ENST00000394888 OR2A5Q96R48 311 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms