RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SLC9A6Q92581 669 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC35A4Q96G79 324 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 TREX2Q9BQ50 279 aaPredicted RBP11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 DOHHQ9BU89 302 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 BDH2Q9BUT1 245 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 IL1RAPQ9NPH3 570 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 P2RX2Q9UBL9 471 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 MRPS33Q9Y291 106 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 U3KQV3 271 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 A0A1B0GVG6 124 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 PRAMEF25A6NGN4 478 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 GNGT2O14610 69 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 CTNSO60931 367 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 FABP3P05413 133 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 CHRM4P08173 479 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 ANKRD34CP0C6C1 535 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 MSL3P1P0C860 447 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 SLC35E2P0CK97 266 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 GRK6P43250 576 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 MAGEA2P43356 314 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 DUSP3P51452 185 aaPredicted RBP11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 EMP3P54852 163 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 FOXL2P58012 376 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 MFSD12Q6NUT3 480 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 TMEM179BQ7Z7N9 219 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF595Q8IYB9 648 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 MS4A4EQ96PG1 132 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 ACTRT3Q9BYD9 372 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 FANCEQ9HB96 536 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 APMAPQ9HDC9 416 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 NECTIN3Q9NQS3 549 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 OCIAD1Q9NX40 245 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 VNN3Q9NY84 501 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 NTMQ9P121 344 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 PTGFRNQ9P2B2 879 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 DNAJB9Q9UBS3 223 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 FTSJ1Q9UET6 329 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 RAB26Q9ULW5 256 aa11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 C19orf53Q9UNZ5 99 aaPredicted RBP11.4□□□□□ -0.59
SPTBN1-203ENST00000389980 OTOGLQ3ZCN5 2332 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 D6RAR5 112 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 CLDN4O14493 209 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 EI24O14681 340 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 DENRO43583 198 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 LDOC1O95751 146 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 YAP1P46937 504 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 CHN2P52757 468 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 LAPTM4AQ15012 233 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 GPAT3Q53EU6 434 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 CCDC157Q569K6 752 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 VWA2Q5GFL6 755 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 OTUD3Q5T2D3 398 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 MFSD4BQ5TF39 518 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 TSEN54Q7Z6J9 526 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 LGI4Q8N135 537 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 SLC38A9Q8NBW4 561 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 CDS1Q92903 461 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 C7orf34Q96L11 122 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 COL21A1Q96P44 957 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 QRSL1Q9H0R6 528 aaKnown RBP11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 ZNF304Q9HCX3 659 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 ENAMQ9NRM1 1142 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 LANCL2Q9NS86 450 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 ITGB1BP2Q9UKP3 347 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 SH3GLB1Q9Y371 365 aa11.39□□□□□ -0.59
SPTBN1-203ENST00000389980 TMEM247A6NEH6 219 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CDX4O14627 284 aaPredicted RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 DSCR3O14972 297 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PLOD3O60568 738 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PRSS23O95084 383 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 H6PDO95479 791 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ACP2P11117 423 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 FBLP22087 321 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 EFNA3P52797 238 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 DUSP8Q13202 625 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 TMED1Q13445 227 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 DUSP5Q16690 384 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 MINDY4Q4G0A6 757 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 IQCCQ4KMZ1 466 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ARHGAP40Q5TG30 622 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ANKRD34AQ69YU3 496 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PWWP2BQ6NUJ5 590 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PPP4R4Q6NUP7 873 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 DBX2Q6ZNG2 339 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PATL1Q86TB9 770 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 TMEM151BQ8IW70 566 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 MARVELD2Q8N4S9 558 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 ADAMTS15Q8TE58 950 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CTHRC1Q96CG8 243 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 RBM18Q96H35 190 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 PTCHD1Q96NR3 888 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CTRCQ99895 268 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 SLC7A5P2Q9GIP4 190 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 Q9H521 79 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 CXorf21Q9HAI6 301 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 DMXL1Q9Y485 3027 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 A0A1B0GX78 115 aa11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 NTN3O00634 580 aaPredicted RBP11.38□□□□□ -0.59
SPTBN1-203ENST00000389980 MFN2O95140 757 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms