RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 FKBP10Q96AY3 582 aa13.54□□□□□ -0.24
RTF1-201ENST00000389629 S100A16Q96FQ6 103 aaKnown RBP13.54□□□□□ -0.24
RTF1-201ENST00000389629 FAM46AQ96IP4 442 aaKnown RBP13.54□□□□□ -0.24
RTF1-201ENST00000389629 B4DXG7 233 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 SLC22A5O76082 557 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 MT-ND4P03905 459 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 HIST1H2ABP04908 130 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 AOAHP28039 575 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 GPLD1P80108 840 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 AFMIDQ63HM1 303 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 C8orf82Q6P1X6 216 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 HIST3H2AQ7L7L0 130 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZNF615Q8N8J6 731 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZFAND1Q8TCF1 268 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 HIST1H2ACQ93077 130 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 IL17FQ96PD4 163 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 MCHR1Q99705 422 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 KLHL21Q9UJP4 597 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 PDCD5O14737 125 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 GMFGO60234 142 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 CREBL2O60519 120 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 RGS9O75916 674 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 TP53P04637 393 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 PRR35P0CG20 571 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 HBA1P69905 142 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 PSPHP78330 225 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 CLPPQ16740 277 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ARMC6Q6NXE6 501 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 BRAT1Q6PJG6 821 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZNF627Q7L945 461 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 OR9A1PQ8NGU1 263 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZNF461Q8TAF7 563 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 C16orf78Q8WTQ4 265 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 SCLYQ96I15 445 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZSWIM3Q96MP5 696 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 CD180Q99467 661 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 C1QTNF3Q9BXJ4 246 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 METTL17Q9H7H0 456 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 CALML5Q9NZT1 146 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 STOX2Q9P2F5 926 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 CSNK1G3Q9Y6M4 447 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 TRBV4-1A0A0J9YWV2 114 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 TEX51A0A1B0GUA7 166 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 HTR1AP08908 422 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 PTPN2P17706 415 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ERVK-25P63136 954 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ALKAL2Q6UX46 152 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 FAM129CQ86XR2 697 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 GNPDA2Q8TDQ7 276 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ACOT12Q8WYK0 555 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 PRDM9Q9NQV7 894 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 RASD1Q9Y272 281 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 PLEKHA6Q9Y2H5 1048 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 FRS3O43559 492 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 HOXD8P13378 290 aaPredicted RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 SKP1P63208 163 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 PRKCZQ05513 592 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 C3P1Q6ZMU1 363 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 OR51A7Q8NH64 312 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZNF566Q969W8 418 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 RGMAQ96B86 450 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 AIFM2Q9BRQ8 373 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ALOXE3Q9BYJ1 711 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 RETREG1Q9H6L5 497 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 ZNF639Q9UID6 485 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 POLR1DQ9Y2S0 133 aa13.53□□□□□ -0.24
RTF1-201ENST00000389629 NOP16Q9Y3C1 178 aaKnown RBP13.53□□□□□ -0.24
RTF1-201ENST00000389629 GALTP07902 379 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 NT5EP21589 574 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 VAMP1P23763 118 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 PTPN6P29350 595 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.24
RTF1-201ENST00000389629 METTL2BQ6P1Q9 378 aaKnown RBP13.52□□□□□ -0.24
RTF1-201ENST00000389629 PLBD1Q6P4A8 553 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 OR8D1Q8WZ84 308 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 SGTBQ96EQ0 304 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 DHRS9Q9BPW9 319 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 SLC6A13Q9NSD5 602 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 NDUFAF4Q9P032 175 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 TRBV23OR9-2A0A075B6M9 112 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 PCCBP05166 539 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 INHBBP09529 407 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 ACADMP11310 421 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 SPINT3P49223 89 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 CCR8P51685 355 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 SGSHP51688 502 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 EIF2B5Q13144 721 aaKnown RBP13.52□□□□□ -0.24
RTF1-201ENST00000389629 GRHL2Q6ISB3 625 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 ARMC10Q8N2F6 343 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 ZNF676Q8N7Q3 588 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 POMGNT2Q8NAT1 580 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 OR2T33Q8NG76 320 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 OR4F15Q8NGB8 312 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms