RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 TRPM6Q9BX84 2022 aa17.89■□□□□ 0.46
CSPG5-202ENST00000383738 LOXHD1Q8IVV2 1947 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 PRKACAP17612 351 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 WDR53Q7Z5U6 358 aaPredicted RBP17.89■□□□□ 0.45
CSPG5-202ENST00000383738 TMC8Q8IU68 726 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 GOLM1Q8NBJ4 401 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 B3GNT7Q8NFL0 401 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 RIT1Q92963 219 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 GINS4Q9BRT9 223 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 SPATA5L1Q9BVQ7 753 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 HCN3Q9P1Z3 774 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 HCN2Q9UL51 889 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 POLR1DQ9Y2S0 133 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 DRD1P21728 446 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 RAB28P51157 221 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 CDK6Q00534 326 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 PROX2Q3B8N5 592 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 LEXMQ3ZCV2 418 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 NXPE4Q6UWF7 544 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 B3GLCTQ6Y288 498 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 METTL21AQ8WXB1 218 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 CAMK1GQ96NX5 476 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 RAB11FIP5Q9BXF6 653 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 FAM25EA8MYX2 175 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 PEX11BO96011 259 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 OR10H4Q8NGA5 316 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 COQ8AQ8NI60 647 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 PATE1Q8WXA2 126 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 TADA1Q96BN2 335 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 ABCG5Q9H222 651 aa17.89■□□□□ 0.45
CSPG5-202ENST00000383738 DOCK6Q96HP0 2047 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 KHNYNO15037 678 aaKnown RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 CLCN7P51798 805 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 RHAGQ02094 409 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 SP140Q13342 867 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 Q7L0L9 218 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 UFD1Q92890 307 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 GPR34Q9UPC5 381 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 SOBPA7XYQ1 873 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 LAMTOR5O43504 91 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 MMP12P39900 470 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 STARP49675 285 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 ZNF282Q9UDV7 671 aaPredicted RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 A0A1B0GW55 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 CD8B2A6NJW9 211 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 EIF3FO00303 357 aaPredicted RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DNAJB5O75953 348 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4L2P0CJ85 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4L3P0CJ86 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4L4P0CJ87 422 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4L5P0CJ88 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4L6P0CJ89 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4L7P0CJ90 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 CD8BP10966 210 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DSTNP60981 165 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 HSF2Q03933 536 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DLX2Q07687 328 aaPredicted RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 TATDN3Q17R31 274 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 CPZQ66K79 652 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 XAF1Q6GPH4 301 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 SHQ1Q6PI26 577 aaKnown RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DHRS4L2Q6PKH6 230 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 BCDIN3DQ7Z5W3 292 aaKnown RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 CAMKVQ8NCB2 501 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 GRHL3Q8TE85 626 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 ASB11Q8WXH4 323 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 TSSK6Q9BXA6 273 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 EXTL2Q9UBQ6 330 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 DUX4Q9UBX2 424 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 RPL36Q9Y3U8 105 aaKnown RBP17.88■□□□□ 0.45
CSPG5-202ENST00000383738 PLXNB2O15031 1838 aa17.88■□□□□ 0.45
CSPG5-202ENST00000383738 PCDHGA12O60330 932 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 HK3P52790 923 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 SMPDL3BQ92485 455 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 CRELD1Q96HD1 420 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 C8orf33Q9H7E9 229 aaPredicted RBP17.87■□□□□ 0.45
CSPG5-202ENST00000383738 MGAT4AQ9UM21 535 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 ALPK2Q86TB3 2170 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 EEF1E1O43324 174 aaKnown RBP17.87■□□□□ 0.45
CSPG5-202ENST00000383738 NPPAP01160 153 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 IFITM3Q01628 133 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 SLC3A1Q07837 685 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 GALNT1Q10472 559 aaPredicted RBP17.87■□□□□ 0.45
CSPG5-202ENST00000383738 RNF121Q9H920 327 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 SLC2A4RGQ9NR83 387 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 ENAMQ9NRM1 1142 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 TRPS1Q9UHF7 1281 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 STOML2Q9UJZ1 356 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 FAM227AF5H4B4 570 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 STX11O75558 287 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 JRKO75564 520 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 MPC1LP0DKB6 136 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 SDHBP21912 280 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 TIA1P31483 386 aaKnown RBP eCLIP17.87■□□□□ 0.45
CSPG5-202ENST00000383738 MAGEA12P43365 314 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 CTF1Q16619 201 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 IRAK1BP1Q5VVH5 260 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 ASB15Q8WXK1 588 aa17.87■□□□□ 0.45
CSPG5-202ENST00000383738 TANKQ92844 425 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms