RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 BTBD16Q32M84 506 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 RABL3Q5HYI8 236 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 NANOGP8Q6NSW7 305 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 RNF111Q6ZNA4 994 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 C6orf120Q7Z4R8 191 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 WDR53Q7Z5U6 358 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-202ENST00000377342 VMP1Q96GC9 406 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 C16orf58Q96GQ5 468 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 VSTM2LQ96N03 204 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 NANOGQ9H9S0 305 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 COPS7AQ9UBW8 275 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 HEMK1Q9Y5R4 338 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-202ENST00000377342 EXPH5Q8NEV8 1989 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 PTPRQQ9UMZ3 2332 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 ZNF891A8MT65 544 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-202ENST00000377342 COQ9O75208 318 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 KRT16P08779 473 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 LASP1Q14847 261 aaKnown RBP19.78■□□□□ 0.76
CBWD3-202ENST00000377342 EXT1Q16394 746 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 COX20Q5RI15 118 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 RNF130Q86XS8 419 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 FBXO30Q8TB52 745 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 ELP5Q8TE02 316 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 HOXB13Q92826 284 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-202ENST00000377342 OTUB1Q96FW1 271 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-202ENST00000377342 SLC35G5Q96KT7 338 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 IP6K3Q96PC2 410 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 FOLH1BQ9HBA9 442 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 RAXQ9Y2V3 346 aa19.78■□□□□ 0.76
CBWD3-202ENST00000377342 TRBV11-1A0A0K0K1C0 115 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 PEX12O00623 359 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 MAP3K8P41279 467 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 PSME3P61289 254 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 EBPQ15125 230 aaKnown RBP19.77■□□□□ 0.76
CBWD3-202ENST00000377342 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.77■□□□□ 0.76
CBWD3-202ENST00000377342 OR8J3Q8NGG0 315 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 TMEM125Q96AQ2 219 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 ITPAQ9BY32 194 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 MMP25Q9NPA2 562 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 TAS2R1Q9NYW7 299 aa19.77■□□□□ 0.76
CBWD3-202ENST00000377342 CPAMD8Q8IZJ3 1885 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 BCAS2O75934 225 aaPredicted RBP19.76■□□□□ 0.75
CBWD3-202ENST00000377342 ACP2P11117 423 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 MAN2A2P49641 1150 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 MXRA7P84157 204 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 VAC14Q08AM6 782 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 ZNF155Q12901 538 aaPredicted RBP19.76■□□□□ 0.75
CBWD3-202ENST00000377342 DCAF10Q5QP82 559 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 BHLHB9Q6PI77 547 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 ANGPTL8Q6UXH0 198 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 CCDC121Q6ZUS5 278 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 PGAM4Q8N0Y7 254 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 ZSCAN1Q8NBB4 408 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 OR52N2Q8NGI0 321 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 M1APQ8TC57 530 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 DCBLD2Q96PD2 775 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 YIPF4Q9BSR8 244 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 CMTM6Q9NX76 183 aa19.76■□□□□ 0.75
CBWD3-202ENST00000377342 OR6C76A6NM76 312 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 TAF4O00268 1085 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 KRT75O95678 551 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 SLC7A2P52569 658 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 CORO7P57737 925 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 NCALDP61601 193 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 RNF4P78317 190 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 TLE3Q04726 772 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 NPSR1Q6W5P4 371 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 PROSER1Q86XN7 944 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 SLC15A3Q8IY34 581 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 HORMAD2Q8N7B1 307 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 OR5D16Q8NGK9 328 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 MIPOL1Q8TD10 442 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 THAP4Q8WY91 577 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 VPS50Q96JG6 964 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 LMF2Q9BU23 707 aaKnown RBP19.75■□□□□ 0.75
CBWD3-202ENST00000377342 WWTR1Q9GZV5 400 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 C1orf21Q9H246 121 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 ABCD2Q9UBJ2 740 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 TMEM200CA6NKL6 621 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 NME4O00746 187 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 GPX2P18283 190 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 CLCN2P51788 898 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 PSG6Q00889 435 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 MYBPC3Q14896 1274 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 RGNQ15493 299 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 CDC73Q6P1J9 531 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 TNFAIP8L2Q6P589 184 aaPredicted RBP19.75■□□□□ 0.75
CBWD3-202ENST00000377342 DEFB107AQ8IZN7 70 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 ZNF441Q8N8Z8 693 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 SLC16A11Q8NCK7 471 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 ADIPOR1Q96A54 375 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 BTBD9Q96Q07 612 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 HOPXQ9BPY8 73 aaPredicted RBP19.75■□□□□ 0.75
CBWD3-202ENST00000377342 ACTRT3Q9BYD9 372 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 OR51I1Q9H343 314 aa19.75■□□□□ 0.75
CBWD3-202ENST00000377342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.75■□□□□ 0.75
CBWD3-202ENST00000377342 C15orf38-AP3S2A0A0A6YYH1 394 aa19.74■□□□□ 0.75
CBWD3-202ENST00000377342 ITGAMP11215 1152 aa19.74■□□□□ 0.75
CBWD3-202ENST00000377342 ETFAP13804 333 aa19.74■□□□□ 0.75
CBWD3-202ENST00000377342 PPIBP23284 216 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms