RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TOR1AIP1Q5JTV8 583 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MZT2AQ6P582 158 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FIGNL1Q6PIW4 674 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 VITQ6UXI7 678 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLC9B2Q86UD5 537 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CPOQ8IVL8 374 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR6K6Q8NGW6 343 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR5P2Q8WZ92 322 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZC4H2Q9NQZ6 224 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HCN2Q9UL51 889 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 INMT-MINDY4F8WBC2 141 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HSD3B1P14060 373 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HSD3B2P26439 372 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PPM1AP35813 382 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ETV5P41161 510 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ETV1P50549 477 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZNF362Q5T0B9 420 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LRRTM4Q86VH4 590 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HDDC3Q8N4P3 179 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ANKK1Q8NFD2 765 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZFPM2Q8WW38 1151 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ASB15Q8WXK1 588 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GPATCH2Q9NW75 528 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TXNL4BQ9NX01 149 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MRPL39Q9NYK5 338 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ADAM30Q9UKF2 790 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NOX1Q9Y5S8 564 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C5orf42Q9H799 3197 aa13.6□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAAHO00519 579 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HRO43593 1189 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CTSLP07711 333 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MMP11P24347 488 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ELAVL4P26378 380 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CERS1P27544 350 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ATP12AP54707 1039 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RPL6Q02878 288 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 STX4Q12846 297 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 KCNC3Q14003 757 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TATDN3Q17R31 274 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BHLHB9Q6PI77 547 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 AMIGO1Q86WK6 493 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DCUN1D3Q8IWE4 304 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR9A2Q8NGT5 310 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HMGB4Q8WW32 186 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LCN9Q8WX39 176 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TRIM63Q969Q1 353 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZNF566Q969W8 418 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OPALINQ96PE5 141 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CDV3Q9UKY7 258 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PSME4Q14997 1843 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 A0A1W2PP55 124 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NAA10P41227 235 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PRR5P85299 388 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 IRF5Q13568 498 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LTB4RQ15722 352 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAM83HQ6ZRV2 1179 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 VN1R2Q8NFZ6 395 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SAMD8Q96LT4 415 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CCDC3Q9BQI4 270 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ABCG5Q9H222 651 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BRF2Q9HAW0 419 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 WSB2Q9NYS7 404 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PLEKHM1Q9Y4G2 1056 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TRIM64A6NGJ6 449 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 XCR1P46094 333 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CHRNEQ04844 493 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 PUM1Q14671 1186 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SSX1Q16384 188 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 C18orf63Q68DL7 685 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CCSAPQ6IQ19 270 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MSANTD1Q6ZTZ1 278 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SYT9Q86SS6 491 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 DDX31Q9H8H2 851 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ENAMQ9NRM1 1142 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ASIC5Q9NY37 505 aa13.59□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FAM171A2A8MVW0 826 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NRG2O14511 850 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MAGEB4O15481 346 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RPP14O95059 124 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC2A10O95528 541 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ADH1CP00326 375 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FUT1P19526 365 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PYCR1P32322 319 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ERVFC1P60507 584 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TMEM215Q68D42 235 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NLRP8Q86W28 1048 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms