RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CYB561A3Q8NBI2 242 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SORBS1Q9BX66 1292 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 TMPRSS11EQ9UL52 423 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 KIDINS220Q9ULH0 1771 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 LCKP06239 509 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 RAC2P15153 192 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SSTR4P31391 388 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ZNF280AP59817 542 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ZFAND4Q86XD8 727 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 MYRFLQ96LU7 910 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 MGLLQ99685 303 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 DPH1Q9BZG8 443 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ASF1BQ9NVP2 202 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 GPRC5BQ9NZH0 403 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 VSX1Q9NZR4 365 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 F5H5K5 113 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CRTAPO75718 401 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 P04436 131 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 HTR2BP41595 481 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 PITPNBP48739 271 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CRISP1P54107 249 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CASP6P55212 293 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 C6orf141Q5SZD1 244 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 NXPE4Q6UWF7 544 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 NRMQ8IXM6 262 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ZDHHC14Q8IZN3 488 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 TOR1AIP2Q8NFQ8 470 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 FAM46BQ96A09 425 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 MOAP1Q96BY2 351 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SCAMP2O15127 329 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 FRS3O43559 492 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ACTL6BO94805 426 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SPDEFO95238 335 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 RPS17P08708 135 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 RAB4AP20338 218 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ENDOUP21128 410 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 PBX2P40425 430 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CTXN1P60606 82 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 OR9Q2Q8NGE9 314 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 DAZLQ92904 295 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SLC25A18Q9H1K4 315 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ABCG5Q9H222 651 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 A6NIN4 97 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 NUDT21O43809 227 aaKnown RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 PORP16435 677 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 PGCP20142 388 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 HOXD13P35453 343 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 NPRL3Q12980 569 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 TP53I3Q53FA7 332 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 CDCA2Q69YH5 1023 aaPredicted RBP13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SERPINA12Q8IW75 414 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 ZUFSPQ96AP4 578 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 FAIMQ9NVQ4 179 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 NLKQ9UBE8 527 aa13.05□□□□□ -0.32
COL4A1-201ENST00000375820 SNTB2Q13425 540 aaKnown RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 CDHR3Q6ZTQ4 885 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 OR52N2Q8NGI0 321 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 ASB15Q8WXK1 588 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 PFDN5Q99471 154 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 NAA11Q9BSU3 229 aaPredicted RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 NDUFV2P19404 249 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 HHEXQ03014 270 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 POC1BQ8TC44 478 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 C1orf226A1L170 272 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 KIAA0355O15063 1070 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SLC16A8O95907 504 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 S1PR4O95977 384 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 CD70P32970 193 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 ARSDP51689 593 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 CSNK2A1P68400 391 aaPredicted RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 CTC1Q2NKJ3 1217 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 GSG1LQ6UXU4 331 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 MEX3BQ6ZN04 569 aaKnown RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 CSNK2A3Q8NEV1 391 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 OR5H2Q8NGV7 314 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 FRS2Q8WU20 508 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SAT2Q96F10 170 aaPredicted RBP13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SAMD8Q96LT4 415 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 OR5B2Q96R09 309 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 LRFN1Q9P244 771 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SLC7A7Q9UM01 511 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 STUB1Q9UNE7 303 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 DCDC2BA2VCK2 349 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 M0R3H8 397 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 NTHL1P78549 312 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 GSTM4Q03013 218 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 SPHARQ15513 63 aa13.04□□□□□ -0.32
COL4A1-201ENST00000375820 C6orf132Q5T0Z8 1188 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms