RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PRR11Q96HE9 360 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 WDR83Q9BRX9 315 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 MROQ9BYG7 248 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 ANKRD60Q9BZ19 345 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 LHPPQ9H008 270 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 SLCO3A1Q9UIG8 710 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 TMEM14AQ9Y6G1 99 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 A0A1W2PPK0 400 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 GLOD5A6NK44 160 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 IFNA5P01569 189 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 T-ENOLP0DO92 83 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 CD68P34810 354 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 CASRP41180 1078 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 KBTBD6Q86V97 674 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 NRROSQ86YC3 692 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 ACBD7Q8N6N7 88 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 GLYATL1Q969I3 302 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 BORCS8Q96FH0 119 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 TREX2Q9BQ50 279 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 PLAGL1Q9UM63 463 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 LIPT1Q9Y234 373 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 RBBP6Q7Z6E9 1792 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 KIF13BQ9NQT8 1826 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 NPC1O15118 1278 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 FMO6PO60774 539 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 SNNO75324 88 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 RAD51DO75771 328 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 PAK4O96013 591 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 IFNA1P01562 189 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 ACRV1P26436 265 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 NAA10P41227 235 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 FAM189BP81408 668 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 RUNX3Q13761 415 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 TMEM25Q86YD3 366 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 ZSCAN4Q8NAM6 433 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 CHDHQ8NE62 594 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 NUFIP1Q9UHK0 495 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 TRBV2A0A0J9YWF9 115 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 CD70P32970 193 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 DPP6P42658 865 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 OC90Q02509 493 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 SNTA1Q13424 505 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 NKAPLQ5M9Q1 402 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 DTX3Q8N9I9 347 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 NINJ1Q92982 152 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 URM1Q9BTM9 101 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 PBDC1Q9BVG4 233 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 ZNF701Q9NV72 531 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 GPR83Q9NYM4 423 aa11.7□□□□□ -0.54
NPLOC4-202ENST00000374747 UCHL1P09936 223 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 RORAP35398 523 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ACVR1BP36896 505 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MAGEA6P43360 314 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ZNF41P51814 821 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MEF2AQ02078 507 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MPP7Q5T2T1 576 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 LRIF1Q5T3J3 769 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 SLC22A10Q63ZE4 541 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 DUS1LQ6P1R4 473 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ENPP6Q6UWR7 440 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 VWA5B2Q8N398 1253 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 CPXM2Q8N436 756 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 FTMTQ8N4E7 242 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ARL14Q8N4G2 192 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ZNF283Q8N7M2 679 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 OR5B12Q96R08 314 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 CLEC4EQ9ULY5 219 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 KIAA1217Q5T5P2 1943 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 FARS2O95363 451 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ETV3P41162 512 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MS4A15Q8N5U1 240 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ZNF784Q8NCA9 323 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 KCNK6Q9Y257 313 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 PTGDR2Q9Y5Y4 395 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 K7ERQ8 282 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MPC1LP0DKB6 136 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 C1GALT1C1LP0DN25 315 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 AGXTP21549 392 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 CFL1P23528 166 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 SNRPD2P62316 118 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 RPS21P63220 83 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 OR6C4Q8NGE1 309 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 SCAMP4Q969E2 229 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 TAS2R8Q9NYW2 309 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ACSL5Q9ULC5 683 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 MKI67P46013 3256 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 ZNF701M0R085 212 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 CBLP22681 906 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 AK4P27144 223 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 VIPR2P41587 438 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 PDSS1Q5T2R2 415 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 TMEM205Q6UW68 189 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 SLC16A9Q7RTY1 509 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 CCDC116Q8IYX3 515 aa11.69□□□□□ -0.54
NPLOC4-202ENST00000374747 PROKR1Q8TCW9 393 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms