RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CNPPD1Q9BV87 410 aa22.41■■□□□ 1.18
CDK9-201ENST00000373264 TAPBPLQ9BX59 468 aa22.41■■□□□ 1.18
CDK9-201ENST00000373264 EXOSC4Q9NPD3 245 aaKnown RBP22.41■■□□□ 1.18
CDK9-201ENST00000373264 ENOPH1Q9UHY7 261 aa22.41■■□□□ 1.18
CDK9-201ENST00000373264 CARD8Q9Y2G2 431 aa22.41■■□□□ 1.18
CDK9-201ENST00000373264 CHST2Q9Y4C5 530 aa22.41■■□□□ 1.18
CDK9-201ENST00000373264 CTDSP2O14595 271 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 MPZL2O60487 215 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 KHKP50053 298 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 TRA2BP62995 288 aaKnown RBP22.4■■□□□ 1.18
CDK9-201ENST00000373264 AMER2Q8N7J2 671 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 EHD3Q9NZN3 535 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 GPR52Q9Y2T5 361 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 CCRL2O00421 344 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 FCMRO60667 390 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 UPK1BO75841 260 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 OXSR1O95747 527 aaPredicted RBP22.4■■□□□ 1.18
CDK9-201ENST00000373264 LGI1O95970 557 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 GINS1Q14691 196 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 ITPRIPL2Q3MIP1 535 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 TMEM35AQ53FP2 167 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 C19orf48Q6RUI8 117 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 KRT73Q86Y46 540 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 OR4N5Q8IXE1 308 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 ZNF764Q96H86 408 aaPredicted RBP22.4■■□□□ 1.18
CDK9-201ENST00000373264 OR7D2Q96RA2 312 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 NXF2Q9GZY0 626 aaKnown RBP22.4■■□□□ 1.18
CDK9-201ENST00000373264 RERGLQ9H628 205 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 A0A0C4DFX4 3053 aa22.4■■□□□ 1.18
CDK9-201ENST00000373264 PNMA8CA0A1B0GUJ8 204 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 A0A1W2PRQ8 180 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 GPR89AB7ZAQ6 455 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 PLRG1O43660 514 aaKnown RBP22.39■■□□□ 1.18
CDK9-201ENST00000373264 GPR89BP0CG08 455 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 F3P13726 295 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 SPNP16150 400 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 RNF144AP50876 292 aaPredicted RBP22.39■■□□□ 1.18
CDK9-201ENST00000373264 C6orf132Q5T0Z8 1188 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 SLC48A1Q6P1K1 146 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 KBTBD8Q8NFY9 601 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 CNIH4Q9P003 139 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 NDOR1Q9UHB4 597 aa22.39■■□□□ 1.18
CDK9-201ENST00000373264 DBPQ10586 325 aaPredicted RBP22.39■■□□□ 1.17
CDK9-201ENST00000373264 TJAP1Q5JTD0 557 aa22.39■■□□□ 1.17
CDK9-201ENST00000373264 VN1R4Q7Z5H5 301 aa22.39■■□□□ 1.17
CDK9-201ENST00000373264 TSACCQ96A04 125 aaPredicted RBP22.39■■□□□ 1.17
CDK9-201ENST00000373264 COL26A1Q96A83 441 aa22.39■■□□□ 1.17
CDK9-201ENST00000373264 ZNF229Q9UJW7 825 aa22.39■■□□□ 1.17
CDK9-201ENST00000373264 KLK4Q9Y5K2 254 aa22.39■■□□□ 1.17
CDK9-201ENST00000373264 CPSF4LA6NMK7 179 aaKnown RBP22.38■■□□□ 1.17
CDK9-201ENST00000373264 PROM1O43490 865 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 FLYWCH1Q4VC44 716 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 TMEFF1Q8IYR6 380 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 TTLQ8NG68 377 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 C9orf43Q8TAL5 461 aaPredicted RBP22.38■■□□□ 1.17
CDK9-201ENST00000373264 KLHL6Q8WZ60 621 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 OR1E3Q8WZA6 343 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 SLC38A1Q9H2H9 487 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 ENTPD4Q9Y227 616 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 ARHGEF17Q96PE2 2063 aaPredicted RBP22.38■■□□□ 1.17
CDK9-201ENST00000373264 A0A087WUU8 490 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 TRHRP34981 398 aaPredicted RBP22.38■■□□□ 1.17
CDK9-201ENST00000373264 LBX1P52954 281 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 OLR1P78380 273 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 FAM111BQ6SJ93 734 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 SHFQ7M4L6 423 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 NUP43Q8NFH3 380 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 RASSF5Q8WWW0 418 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 TMEM80Q96HE8 168 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 LRR1Q96L50 414 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 SLC9A8Q9Y2E8 581 aa22.38■■□□□ 1.17
CDK9-201ENST00000373264 PRSS38A1L453 326 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ZNF888P0CJ79 500 aaPredicted RBP22.37■■□□□ 1.17
CDK9-201ENST00000373264 SYT14P1Q58G82 188 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 MFSD4BQ5TF39 518 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 PRICKLE2Q7Z3G6 844 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 OR8J1Q8NGP2 316 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ZCCHC10Q8TBK6 192 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 LCN9Q8WX39 176 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ELP4Q96EB1 424 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ZNF681Q96N22 645 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ZNF624Q9P2J8 865 aaPredicted RBP22.37■■□□□ 1.17
CDK9-201ENST00000373264 PIPP12273 146 aaPredicted RBP22.37■■□□□ 1.17
CDK9-201ENST00000373264 CSTF2P33240 577 aaKnown RBP eCLIP22.37■■□□□ 1.17
CDK9-201ENST00000373264 RPS19P39019 145 aaKnown RBP22.37■■□□□ 1.17
CDK9-201ENST00000373264 AVPR1BP47901 424 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 GIPRP48546 466 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 SHHQ15465 462 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 SPHARQ15513 63 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ZNF311Q5JNZ3 666 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 CLEC12AQ5QGZ9 265 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 TMEM201Q5SNT2 666 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ZNF425Q6IV72 752 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ENPP7Q6UWV6 458 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 OR8D4Q8NGM9 314 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 BBS10Q8TAM1 723 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 ARSGQ96EG1 525 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 BARHL1Q9BZE3 327 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 SEMA4GQ9NTN9 838 aa22.37■■□□□ 1.17
CDK9-201ENST00000373264 A0A1W2PQF6 199 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms