RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ACOT13Q9NPJ3 140 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ANGPT4Q9Y264 503 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 GRIP1Q9Y3R0 1128 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ASB4Q9Y574 426 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 SNRNP200O75643 2136 aaKnown RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 HMX3A6NHT5 357 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 LRRC72A6NJI9 287 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 GLOD5A6NK44 160 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 TNFRSF10CO14798 259 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 DSCR3O14972 297 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 ASGR2P07307 311 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 DRD2P14416 443 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 ATP5A1P25705 553 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 NDUFS1P28331 727 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 AP2S1P53680 142 aaPredicted RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 IL1RL1Q01638 556 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 SLC9A5Q14940 896 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 MLC1Q15049 377 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 ALG11Q2TAA5 492 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 FAM205BPQ63HN1 556 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 NRARPQ7Z6K4 114 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 B3GNT8Q7Z7M8 397 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 NRROSQ86YC3 692 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 ATG16L2Q8NAA4 619 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 MFSD9Q8NBP5 474 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 OR2L5Q8NG80 312 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 HMGB4Q8WW32 186 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 AMDHD1Q96NU7 426 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 KCNC2Q96PR1 638 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 NEDD4LQ96PU5 975 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 GON7Q9BXV9 100 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 THSD1Q9NS62 852 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 RAB23Q9ULC3 237 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 ATG4BQ9Y4P1 393 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 A0A1W2PR48 441 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 HMGN4O00479 90 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 PGRMC2O15173 223 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 MTRF1O75570 445 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 TSPAN9O75954 239 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 RASGRP1O95267 797 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 FADS2O95864 444 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 SRP54P61011 504 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 IL5RAQ01344 420 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 SLAMF1Q13291 335 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 KEAP1Q14145 624 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 FBXO43Q4G163 708 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 RPS26P11Q5JNZ5 115 aaPredicted RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 REEP3Q6NUK4 255 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 OR4C15Q8NGM1 316 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 FLVCR1-AS1Q8TAF5 88 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 SNAPC3Q92966 411 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 FCRL4Q96PJ5 515 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 A4GALTQ9NPC4 353 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 SLC35C2Q9NQQ7 365 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 KRT84Q9NSB2 600 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 APOBEC3BQ9UH17 382 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 NDRG4Q9ULP0 352 aaKnown RBP12.08□□□□□ -0.48
GPC3-201ENST00000370818 TPRKBQ9Y3C4 175 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 ZNF451Q9Y4E5 1061 aa12.08□□□□□ -0.48
GPC3-201ENST00000370818 E9PQ18 207 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 J3KTA2 159 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 CTDSP2O14595 271 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 ADAMDEC1O15204 470 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 MED26O95402 600 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 BCHEP06276 602 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 DBTP11182 482 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 S100A5P33763 92 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 CCT3P49368 545 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 TOR1AIP1Q5JTV8 583 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 PXDC1Q5TGL8 231 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 VN1R4Q7Z5H5 301 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 PAQR7Q86WK9 346 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 CCDC71Q8IV32 467 aaPredicted RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 TTC29Q8NA56 475 aaPredicted RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 RAB8BQ92930 207 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 RHNO1Q9BSD3 238 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 TWSG1Q9GZX9 223 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 KIF17Q9P2E2 1029 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SNX7Q9UNH6 387 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 OR5K3A6NET4 321 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SNTNA6NMZ2 147 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 TNFRSF11BO00300 401 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SEMA4FO95754 770 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 IFNA14P01570 189 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 F3P13726 295 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 CERS1P27544 350 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 RAB8AP61006 207 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SNRPNP63162 240 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 TAGLNQ01995 201 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 SPDYE7PQ495Y7 208 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 Q6ZSR6 202 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SLC30A8Q8IWU4 369 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SLC22A18ASQ8N1D0 253 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 FLCNQ8NFG4 579 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms