RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 CLEC4MQ9H2X3 399 aaPredicted RBP13.96□□□□□ -0.17
RPF1-202ENST00000370656 RHBGQ9H310 441 aa13.96□□□□□ -0.17
RPF1-202ENST00000370656 ZDHHC11Q9H8X9 412 aa13.96□□□□□ -0.17
RPF1-202ENST00000370656 NECTIN3Q9NQS3 549 aa13.96□□□□□ -0.17
RPF1-202ENST00000370656 MMACHCQ9Y4U1 282 aa13.96□□□□□ -0.17
RPF1-202ENST00000370656 PCDHGA11Q9Y5H2 935 aa13.96□□□□□ -0.17
RPF1-202ENST00000370656 EML6Q6ZMW3 1958 aa13.96□□□□□ -0.18
RPF1-202ENST00000370656 VPS13CQ709C8 3753 aa13.96□□□□□ -0.18
RPF1-202ENST00000370656 ARHGAP21Q5T5U3 1957 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 ATP6AP2A0A1C7CYW4 349 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 FAM166BA8MTA8 275 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 RGS14O43566 566 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 ATP6AP2O75787 350 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 B3GALT4O96024 378 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 GPX3P22352 226 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 PIK3R1P27986 724 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 KIR2DL3P43628 341 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 MNAT1P51948 309 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 DGKQP52824 942 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 HYAL2Q12891 473 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 FRG2Q64ET8 278 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 ZZZ3Q8IYH5 903 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 TRPV3Q8NET8 790 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 OR2M7Q8NG81 312 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 RP9Q8TA86 221 aaKnown RBP13.95□□□□□ -0.18
RPF1-202ENST00000370656 UTP15Q8TED0 518 aaKnown RBP13.95□□□□□ -0.18
RPF1-202ENST00000370656 SLC5A11Q8WWX8 675 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 FCRL1Q96LA6 429 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 FRG2BQ96QU4 278 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 NT5DC2Q9H857 520 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 PELI2Q9HAT8 420 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 BRF2Q9HAW0 419 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 SDR39U1Q9NRG7 319 aaPredicted RBP13.95□□□□□ -0.18
RPF1-202ENST00000370656 PNO1Q9NRX1 252 aaKnown RBP13.95□□□□□ -0.18
RPF1-202ENST00000370656 DYRK1BQ9Y463 629 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 GPR45Q9Y5Y3 372 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 PTGDR2Q9Y5Y4 395 aa13.95□□□□□ -0.18
RPF1-202ENST00000370656 NSD1Q96L73 2696 aaPredicted RBP13.95□□□□□ -0.18
RPF1-202ENST00000370656 DNHD1Q96M86 4753 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 SYNDIG1LA6NDD5 238 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 FOXE1O00358 373 aaPredicted RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 WDR1O75083 606 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 RSL1D1O76021 490 aaKnown RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 PDYNP01213 254 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 GLI4P10075 376 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 IDO1P14902 403 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 RAB8AP61006 207 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 CSTF3Q12996 717 aaKnown RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 KIAA0040Q15053 153 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 CPSF6Q16630 551 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPF1-202ENST00000370656 XKR6Q5GH73 641 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 IL20RBQ6UXL0 311 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 CAMKMTQ7Z624 323 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 TSPEARQ8WU66 669 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 NCLNQ969V3 563 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 C11orf24Q96F05 449 aaPredicted RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 LRRC46Q96FV0 321 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 TTTY12Q9BZ98 90 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 DEPPQ9NTK1 212 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 AIG1Q9NVV5 245 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 SIRT5Q9NXA8 310 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 B4GALT7Q9UBV7 327 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 ACAD8Q9UKU7 415 aa13.94□□□□□ -0.18
RPF1-202ENST00000370656 ZNF490Q9ULM2 529 aaPredicted RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 PPIEQ9UNP9 301 aaKnown RBP13.94□□□□□ -0.18
RPF1-202ENST00000370656 A0A0G2JNJ9 132 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 CFAP73A6NFT4 308 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 CLDN4O14493 209 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 OR2J2O76002 312 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 IGHG3P01860 377 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 COX4I1P13073 169 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 DLX5P56178 289 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 MAD2L1Q13257 205 aaPredicted RBP13.93□□□□□ -0.18
RPF1-202ENST00000370656 ATP6AP1LQ52LC2 224 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 PDCD4Q53EL6 469 aaKnown RBP13.93□□□□□ -0.18
RPF1-202ENST00000370656 PAGE2BQ5JRK9 111 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 WLSQ5T9L3 541 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 WDR53Q7Z5U6 358 aaPredicted RBP13.93□□□□□ -0.18
RPF1-202ENST00000370656 FAM109AQ8N4B1 249 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 OR7G3Q8NG95 312 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 UBE2E3Q969T4 207 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 SARAFQ96BY9 339 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 REPS1Q96D71 796 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 CMTM7Q96FZ5 175 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 FAM173AQ9BQD7 235 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 AIF1LQ9BQI0 150 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 ACPTQ9BZG2 426 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 LIME1Q9H400 295 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 GSX1Q9H4S2 264 aaPredicted RBP13.93□□□□□ -0.18
RPF1-202ENST00000370656 ELOVL6Q9H5J4 265 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 LDAHQ9H6V9 325 aa13.93□□□□□ -0.18
RPF1-202ENST00000370656 FARSBQ9NSD9 589 aaKnown RBP13.93□□□□□ -0.18
RPF1-202ENST00000370656 TAS2R1Q9NYW7 299 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms