RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ABCB7O75027 752 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 SUPT7LO94864 414 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 ACTL6AO96019 429 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 HMOX2P30519 316 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 CEACAM8P31997 349 aaPredicted RBP13.56□□□□□ -0.24
CTSD-202ENST00000367196 CDH13P55290 713 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 FBXL19-AS1Q494R0 122 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 SPIN4Q56A73 249 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 UBAP2Q5T6F2 1119 aaKnown RBP13.56□□□□□ -0.24
CTSD-202ENST00000367196 NSUN5P2Q63ZY6 315 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 BICRALQ6AI39 1079 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 ANGPTL8Q6UXH0 198 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 GPRIN3Q6ZVF9 776 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 SLC22A9Q8IVM8 553 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 C1orf52Q8N6N3 182 aaKnown RBP13.56□□□□□ -0.24
CTSD-202ENST00000367196 GBP7Q8N8V2 638 aaPredicted RBP13.56□□□□□ -0.24
CTSD-202ENST00000367196 RNASE6Q93091 150 aaKnown RBP13.56□□□□□ -0.24
CTSD-202ENST00000367196 TM4SF18Q96CE8 201 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 OMA1Q96E52 524 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 ZNF382Q96SR6 550 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 ITPAQ9BY32 194 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 FARSBQ9NSD9 589 aaKnown RBP13.56□□□□□ -0.24
CTSD-202ENST00000367196 FETUBQ9UGM5 382 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 MCM8Q9UJA3 840 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 UTS2RQ9UKP6 389 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 PLLPQ9Y342 182 aa13.56□□□□□ -0.24
CTSD-202ENST00000367196 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 GNG14A0A1W2PPG7 69 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 FRG2CA6NGY1 282 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 MANBAO00462 879 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 GNB5O14775 395 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 SNPHO15079 494 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ULK1O75385 1050 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 OR4F21O95013 312 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 DRD2P14416 443 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 S1PR1P21453 382 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 PTPN6P29350 595 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 KRT20P35900 424 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 HSD17B3P37058 310 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 PPICP45877 212 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 GSTM5P46439 218 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ART1P52961 327 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 DLX5P56178 289 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ACSM2AQ08AH3 577 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 HEPACAMQ14CZ8 416 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 NNATQ16517 81 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 FNDC7Q5VTL7 733 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ACSM2BQ68CK6 577 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ENPP6Q6UWR7 440 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 TIFABQ6ZNK6 161 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 RPS27LQ71UM5 84 aaKnown RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 KIF18BQ86Y91 864 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ZZZ3Q8IYH5 903 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 CDYL2Q8N8U2 506 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 NOA1Q8NC60 698 aaKnown RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 TNIP2Q8NFZ5 429 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 OR52R1Q8NGF1 315 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ZNF675Q8TD23 568 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ABTB1Q969K4 478 aaPredicted RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 CTHRC1Q96CG8 243 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 RMND5BQ96G75 393 aaPredicted RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 TRIB1Q96RU8 372 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 POLDIP3Q9BY77 421 aaKnown RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 CALHM2Q9HA72 323 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 DNAJB12Q9NXW2 375 aaKnown RBP13.55□□□□□ -0.24
CTSD-202ENST00000367196 SENP1Q9P0U3 644 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 ZNF639Q9UID6 485 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 DTX4Q9Y2E6 619 aa13.55□□□□□ -0.24
CTSD-202ENST00000367196 AKAP9Q99996 3911 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 PRAMEF25A6NGN4 478 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 OR6C70A6NIJ9 312 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 KIF2AO00139 706 aaPredicted RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 TO15178 435 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 PCDH7O60245 1069 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 CTAG2O75638 210 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 CBR3O75828 277 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 ENO1P06733 434 aaKnown RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 CYP4B1P13584 511 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 BMP7P18075 431 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 TSPAN8P19075 237 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 DRD5P21918 477 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 ATP5F1P24539 256 aaPredicted RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 ECHS1P30084 290 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 DNAJA1P31689 397 aaKnown RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 OPRM1P35372 400 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 MRPS22P82650 360 aaKnown RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 MGAT2Q10469 447 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 EXOSC7Q15024 291 aaKnown RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 EIPR1Q53HC9 387 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 ZNF678Q5SXM1 525 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 FAM111BQ6SJ93 734 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 SEM1Q6ZVN7 128 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 RELL2Q8NC24 303 aaPredicted RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 CHDHQ8NE62 594 aaPredicted RBP13.54□□□□□ -0.24
CTSD-202ENST00000367196 ADCY4Q8NFM4 1077 aa13.54□□□□□ -0.24
CTSD-202ENST00000367196 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms