RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SAXO2Q658L1 398 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 BHLHB9Q6PI77 547 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 DNAJC14Q6Y2X3 702 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 LRRC69Q6ZNQ3 347 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 C6orf120Q7Z4R8 191 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 CLEC4FQ8N1N0 589 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 OR8K3Q8NH51 312 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 NEURL3Q96EH8 262 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 FER1L6-AS2Q96M78 137 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 CGREF1Q99674 301 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 SLC35A5Q9BS91 424 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ZCCHC3Q9NUD5 404 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 GPATCH2Q9NW75 528 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 GID8Q9NWU2 228 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 COPS7AQ9UBW8 275 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 BCAP29Q9UHQ4 241 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 RNF103-CHMP3A0A140T963 221 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 MASP2O00187 686 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 CLIC1O00299 241 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 PRAMEF2O60811 474 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 COQ9O75208 318 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 C1QCP02747 245 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 SERPINA7P05543 415 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 PRKAR1AP10644 381 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 SOAT1P35610 550 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 MAP3K8P41279 467 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 CPA2P48052 419 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 CLCN2P51788 898 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 PRKAG1P54619 331 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 BNIP1Q12981 228 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 ART3Q13508 389 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 EXOSC6Q5RKV6 272 aaKnown RBP11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 BROXQ5VW32 411 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 C8orf82Q6P1X6 216 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 ZCCHC12Q6PEW1 402 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 CCDC81Q6ZN84 652 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 RNF111Q6ZNA4 994 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 TMEM102Q8N9M5 508 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 ZSCAN1Q8NBB4 408 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 OR5AK3PQ8NH89 298 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 C16orf52Q8NHV5 167 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 HOXB13Q92826 284 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 ANKRD27Q96NW4 1050 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 GPATCH1Q9BRR8 931 aaKnown RBP11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 TPT1P8Q9HAU6 139 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 IL1RL2Q9HB29 575 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 PRODH2Q9UF12 536 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 POLHQ9Y253 713 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 CFL2Q9Y281 166 aa11.52□□□□□ -0.57
NIF3L1-201ENST00000359683 EBAG9O00559 213 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 NME6O75414 186 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 ZFAND5O76080 213 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 UNC5CO95185 931 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 KRT75O95678 551 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 HMGN2P05204 90 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 CELA2AP08217 269 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 CHI3L1P36222 383 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 NUDT2P50583 147 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 MVDP53602 400 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 SOX8P57073 446 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 RNF4P78317 190 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 VAC14Q08AM6 782 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 AIMP2Q13155 320 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 MYBPC3Q14896 1274 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 NANOGP8Q6NSW7 305 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 HSDL2Q6YN16 418 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 C9orf40Q8IXQ3 194 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 KIF2BQ8N4N8 673 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 ADIPOR1Q96A54 375 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 AURKBQ96GD4 344 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 C16orf58Q96GQ5 468 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 VSTM2LQ96N03 204 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 MS4A4EQ96PG1 132 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 HOPXQ9BPY8 73 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 HEMK1Q9Y5R4 338 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-201ENST00000359683 MED13Q9UHV7 2174 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 TRBV11-1A0A0K0K1C0 115 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 TMEM200CA6NKL6 621 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 TTC36A6NLP5 189 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 B2RBV5 119 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 K7ENP7 123 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 PRKNO60260 465 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 KRT16P08779 473 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 GPX2P18283 190 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 MATN1P21941 496 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 PPIBP23284 216 aaKnown RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 MAGEA8P43361 318 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 PPICP45877 212 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 MAN2A2P49641 1150 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 PRIM2P49643 509 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 RRADP55042 308 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 UCNP55089 124 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 AP2B1P63010 937 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 CHAF1BQ13112 559 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 TP53BP2Q13625 1128 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 CAPRIN1Q14444 709 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms